Commits · 8e423e424382c7c801e4e6047acfb8e35fec776e · Sainsbury Laboratory / teamHJ / publications / Refahi_etal_2020

Dec 16, 2020
- Formatting · 8e423e42
  Argyris Z authored 4 years ago
  
  8e423e42
- Formatting · 4e1febc1
  Argyris Z authored 4 years ago
  
  4e1febc1
- Formatting · 917b9a90
  Argyris Z authored 4 years ago
  
  917b9a90
- Formatting · 009185d3
  Argyris Z authored 4 years ago
  
  009185d3
- Better description of contents · fde2387c
  Argyris Z authored 4 years ago
  
  fde2387c
- renamed files · 376f8158
  Argyris Z authored 4 years ago
  
  376f8158
- Renames the directory to its content rather than figure numbers · 8a5e8879
  Argyris Z authored 4 years ago
  
  8a5e8879
- Deletes unused directories · 2e45c6cf
  Argyris Z authored 4 years ago
  
  2e45c6cf
Dec 11, 2020
- Updates parallel instruction with a loop · 131d7efb
  Argyris Z authored 4 years ago
  
  131d7efb
- Assumes new location for data · aa0e509f
  Argyris Z authored 4 years ago
  
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- Updates instructions to run in a venv · 39c28af0
  Argyris Z authored 4 years ago
  
  39c28af0
Dec 07, 2020
- sync · 900ef823
  Argyris Z authored 4 years ago
  
  900ef823
Nov 25, 2020
- Lfy specific calculations for growth rates · af95fb60
  Argyris Z authored 4 years ago
  
  af95fb60
- sync · 21536d67
  Argyris Z authored 4 years ago
  
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- Adds L1 cells for t=32h · 5fd692e0
  Argyris Z authored 4 years ago
  
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- sync experiments · 8ded0e3e
  Argyris Z authored 4 years ago
  
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- Adds filtering and annotation diffs · e4fba183
  Argyris Z authored 4 years ago
  
  e4fba183
Sep 24, 2020
- In case there are not neighbours defined · aaf64df9
  Argyris Z authored 4 years ago
  
  aaf64df9
- Generic exprs so add properties that are not nec. genes · 80c8ca11
  Argyris Z authored 4 years ago
  
  80c8ca11
Sep 14, 2020
- Various comparisons used in the text · ac9207e2
  Argyris Z authored 4 years ago
  
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- Adds a region in the middle of central zone · 09a26a17
  Argyris Z authored 4 years ago
  
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- Separate stage 3 and stage 4 comparisons · 745d9b6a
  Argyris Z authored 4 years ago
  
  745d9b6a
- Makes plotting better + adds regions · ec83633a
  Argyris Z authored 4 years ago
  
  ec83633a
- Fixes plotting, labels, axes boundaries etc. · e909ccb5
  Argyris Z authored 4 years ago
  
  e909ccb5
Sep 09, 2020
- More reporting, plotting · d9d54be3
  Argyris Z authored 4 years ago
  
  d9d54be3
Sep 04, 2020
- More comparison plots · db2ef8af
  Argyris Z authored 4 years ago
  
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Sep 03, 2020
- Cosmetic changes · 9400af51
  Argyris Z authored 4 years ago
  
  9400af51
- Analysis of lfy mutant · be98ecf4
  Argyris Z authored 4 years ago
  
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Aug 19, 2020
- Investigation into growth control predicatbility · 827ed750
  Argyris Z authored 4 years ago
  
  827ed750
Jul 10, 2020
- Fixes double swapping.. · 837a0a71
  Argyris Z authored 4 years ago
  
  837a0a71
Jul 07, 2020
- Adds morphonet gene expression and script to convert to time expressions · 373ce597
  Argyris Z authored 4 years ago
  
  373ce597
- Adds tv format files to data · 6d393242
  Argyris Z authored 4 years ago
  
  6d393242
- Now run everything from inside the directory · 511dc584
  Argyris Z authored 4 years ago
  
  511dc584
- Added some instructions on how to run the code · 4501b627
  Argyris Z authored 4 years ago
  
  4501b627
- Changed entry point and added installation of jupyter required for running the notebooks · 9509cdda
  Argyris Z authored 4 years ago
  
  9509cdda
- Files for boolean regulation analysis · c84a8c9a
  Argyris Z authored 4 years ago
  
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- Removes · 64656f0e
  Argyris Z authored 4 years ago
  
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- Extension · 35873cf9
  Argyris Z authored 4 years ago
  
  35873cf9
- Run from current dir · 78fb715d
  Argyris Z authored 4 years ago
  
  78fb715d
Jul 06, 2020
- TV convert functions + more types · 3f26a0b4
  Argyris Z authored 4 years ago
  
  3f26a0b4