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Commit 6f22bc68 authored by L. Bower's avatar L. Bower
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making tests work

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.gitlab-ci.yml
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...@@ -68,7 +68,7 @@ stages: ...@@ -68,7 +68,7 @@ stages:
- ls $PACKAGES_DIR - ls $PACKAGES_DIR
half_fat_tests: half_fat_tests:
when: always when: manual
stage: half-fat stage: half-fat
extends: .before_script extends: .before_script
...@@ -85,7 +85,7 @@ half_fat_tests: ...@@ -85,7 +85,7 @@ half_fat_tests:
expire_in: 10 days expire_in: 10 days
half_fat_epi_tests: half_fat_epi_tests:
when: always when: manual
stage: half-fat stage: half-fat
extends: .before_script extends: .before_script
...@@ -126,7 +126,7 @@ full_fat_depo: ...@@ -126,7 +126,7 @@ full_fat_depo:
expire_in: 10 days expire_in: 10 days
epi_fit: epi_fit:
when: manual when: always
stage: epi-fit stage: epi-fit
extends: .before_script extends: .before_script
tags: ["ewas-production"] tags: ["ewas-production"]
...@@ -134,6 +134,8 @@ epi_fit: ...@@ -134,6 +134,8 @@ epi_fit:
- > - >
cd $CI_PROJECT_DIR cd $CI_PROJECT_DIR
EMAIL_CRED=/storage/app/EWS_prod/envs/credentials/Cred_gmail.json
mkdir $CI_PROJECT_DIR/fitting_outputs mkdir $CI_PROJECT_DIR/fitting_outputs
python3 $PACKAGES_DIR/epimodel/ews/epi_model/fit_lb584.py python3 $PACKAGES_DIR/epimodel/ews/epi_model/fit_lb584.py
......
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