Commits · f7267ee640cdcdd651785756ac55563f46bb3cce · Sainsbury Laboratory / teamHJ / publications / Refahi_etal_2020

Jun 22, 2020
- Cleanup · f7267ee6
  Argyris Z authored 4 years ago
  
  f7267ee6
- Clears output · c5e7badf
  Argyris Z authored 4 years ago
  
  c5e7badf
- Split the anisotropy calculations to the ones done for all flowers vs ones... · f306a38f
  Argyris Z authored 4 years ago
  
  Split the anisotropy calculations to the ones done for all flowers vs ones that are done only for flower 1
  f306a38f
- Cleanup · 94c6710f
  Argyris Z authored 4 years ago
  
  94c6710f
- Use the L1 cells as computed when creating the Seg object for filtering on L1 · bfed3643
  Argyris Z authored 4 years ago
  
  bfed3643
- Adds new notebook for geometry-only calculations re. growth · 90a19ec9
  Argyris Z authored 4 years ago
  
  90a19ec9
- Geometry only reading + L1 filtering based on neighbours for flowers without genetic information · 5e707248
  Argyris Z authored 4 years ago
  
  5e707248
Jun 19, 2020
- Sync · 53ca74fa
  Argyris Z authored 4 years ago
  
  53ca74fa
- Adds more analysis of growth code · c231f93a
  Argyris Z authored 4 years ago
  
  c231f93a
- Corrects type signature · 2401ee0b
  Argyris Z authored 4 years ago
  
  2401ee0b
- Adds other modules to common · 91faf6cb
  Argyris Z authored 4 years ago
  
  91faf6cb
- Adds runner script for mypy · afd0304d
  Argyris Z authored 4 years ago
  
  afd0304d
- Fixes installing common package · f3fa12d3
  Argyris Z authored 4 years ago
  
  f3fa12d3
- Fixes magic paths etc. · 94a585a7
  Argyris Z authored 4 years ago
  
  94a585a7
Jun 18, 2020
- Adds files req. for reproducibility · da088f5f
  Argyris Z authored 4 years ago
  
  da088f5f
- Removes as much as possible magic paths · 1f395d34
  Argyris Z authored 4 years ago
  
  1f395d34
- Removes as much as possible magic paths · 5c2481f3
  Argyris Z authored 4 years ago
  
  5c2481f3
- Removes duplicate code · 02559a0d
  Argyris Z authored 4 years ago
  
  02559a0d
- Adds type information via mypy typing to common · 9ffd7914
  Argyris Z authored 4 years ago
  
  9ffd7914
Mar 24, 2020
- Adds notebook for producing growth rate related figures · 15c895f2
  azardilis authored 4 years ago
  
  15c895f2
Mar 09, 2020
- First commit for geneRegulation code · a7ab066b
  azardilis authored 5 years ago
  
  a7ab066b
- First commit of growth analysis · 014a98bf
  azardilis authored 5 years ago
  
  014a98bf
- Removes temp files · 24efc1c9
  azardilis authored 5 years ago
  
  24efc1c9
- Removes pycache from package · a5031185
  azardilis authored 5 years ago
  
  a5031185
- Adds a dir for common packages that includes modules used across scripts · 8f9a125c
  azardilis authored 5 years ago
  
  8f9a125c
Jan 15, 2020
- email updated · e58c3e7f
  yassin.refahi authored 5 years ago
  
  e58c3e7f
Dec 05, 2019
- Added initial folders for addition of scripts used. · 352c1901
  Henrik Jonsson authored 5 years ago
  
  352c1901
- Update README.md · 1ad35605
  Henrik Jönsson authored 5 years ago
  
  1ad35605
- Initial commit · 3f2126ba
  Henrik Jönsson authored 5 years ago
  
  3f2126ba

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