Commits · aa6cdcab08669e02ac6186f34433a30b97463551 · Sainsbury Laboratory / teamHJ / publications / Refahi_etal_2020

Jan 26, 2021
- From images to fm format · aa6cdcab
  Argyris Z authored 4 years ago
  
  aa6cdcab
- Removes output, fixes paths · 3db98660
  Argyris Z authored 4 years ago
  
  3db98660
- Transform images to fm format · 29d23e93
  Argyris Z authored 4 years ago
  
  29d23e93
- Version of packages · ed63bd42
  Argyris Z authored 4 years ago
  
  ed63bd42
- Paths · ccefb67f
  Argyris Z authored 4 years ago
  
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- Ignore neighbours in most cases + new evaluation of ast · 1b93ea9a
  Argyris Z authored 4 years ago
  
  1b93ea9a
- Make sure that scikit and numpy are compatible + ipython · 55c34181
  Argyris Z authored 4 years ago
  
  55c34181
- Adds note about python version · c9d417bc
  Argyris Z authored 4 years ago
  
  c9d417bc
- New location for expression data as download from data repository · 10019ba6
  Argyris Z authored 4 years ago
  
  10019ba6
Jan 15, 2021
- Pdf version of how-to instructions for Morphonet · e79275ee
  Argyris Z authored 4 years ago
  
  e79275ee
- Merge branch 'azardilis-master-patch-51975' into 'master' · c266945f
  Argyris Z authored 4 years ago
  
  Initial commit UpdateMorphonet.md See merge request slcu/teamHJ/publications/refahi_etal_2020!2
  c266945f
- Initial commit UpdateMorphonet.md · 043336c3
  Argyris Z authored 4 years ago
  
  043336c3
Dec 16, 2020
- Formatting · f66ec312
  Argyris Z authored 4 years ago
  
  f66ec312
- Formatting · 7e5c08e1
  Argyris Z authored 4 years ago
  
  7e5c08e1
- Formatting · 8e423e42
  Argyris Z authored 4 years ago
  
  8e423e42
- Formatting · 4e1febc1
  Argyris Z authored 4 years ago
  
  4e1febc1
- Formatting · 917b9a90
  Argyris Z authored 4 years ago
  
  917b9a90
- Formatting · 009185d3
  Argyris Z authored 4 years ago
  
  009185d3
- Better description of contents · fde2387c
  Argyris Z authored 4 years ago
  
  fde2387c
- renamed files · 376f8158
  Argyris Z authored 4 years ago
  
  376f8158
- Renames the directory to its content rather than figure numbers · 8a5e8879
  Argyris Z authored 4 years ago
  
  8a5e8879
- Deletes unused directories · 2e45c6cf
  Argyris Z authored 4 years ago
  
  2e45c6cf
Dec 11, 2020
- Updates parallel instruction with a loop · 131d7efb
  Argyris Z authored 4 years ago
  
  131d7efb
- Assumes new location for data · aa0e509f
  Argyris Z authored 4 years ago
  
  aa0e509f
- Updates instructions to run in a venv · 39c28af0
  Argyris Z authored 4 years ago
  
  39c28af0
Dec 07, 2020
- sync · 900ef823
  Argyris Z authored 4 years ago
  
  900ef823
Nov 25, 2020
- Lfy specific calculations for growth rates · af95fb60
  Argyris Z authored 4 years ago
  
  af95fb60
- sync · 21536d67
  Argyris Z authored 4 years ago
  
  21536d67
- Adds L1 cells for t=32h · 5fd692e0
  Argyris Z authored 4 years ago
  
  5fd692e0
- sync experiments · 8ded0e3e
  Argyris Z authored 4 years ago
  
  8ded0e3e
- Adds filtering and annotation diffs · e4fba183
  Argyris Z authored 4 years ago
  
  e4fba183
Sep 24, 2020
- In case there are not neighbours defined · aaf64df9
  Argyris Z authored 4 years ago
  
  aaf64df9
- Generic exprs so add properties that are not nec. genes · 80c8ca11
  Argyris Z authored 4 years ago
  
  80c8ca11
Sep 14, 2020
- Various comparisons used in the text · ac9207e2
  Argyris Z authored 4 years ago
  
  ac9207e2
- Adds a region in the middle of central zone · 09a26a17
  Argyris Z authored 4 years ago
  
  09a26a17
- Separate stage 3 and stage 4 comparisons · 745d9b6a
  Argyris Z authored 4 years ago
  
  745d9b6a
- Makes plotting better + adds regions · ec83633a
  Argyris Z authored 4 years ago
  
  ec83633a
- Fixes plotting, labels, axes boundaries etc. · e909ccb5
  Argyris Z authored 4 years ago
  
  e909ccb5
Sep 09, 2020
- More reporting, plotting · d9d54be3
  Argyris Z authored 4 years ago
  
  d9d54be3
Sep 04, 2020
- More comparison plots · db2ef8af
  Argyris Z authored 4 years ago
  
  db2ef8af