adding flag for storing output after running

.gitlab-ci.yml

@@ -61,6 +61,7 @@ stages:
       - coordinator=$CI_PROJECT_DIR/coordinator
       - coordinator_tests=$CI_PROJECT_DIR/tests
       - export PYTHONPATH=$PYTHONPATH:$coordinator:$coordinator_tests
+      - echo $PYTHONPATH
 
       - ls $PACKAGES_DIR
       - source /storage/app/miniconda3/bin/activate /storage/app/EWS_prod/envs/conda/py3EWS/
@@ -133,7 +134,7 @@ half_fat_epi_tests:
 full_fat_tests:
   when: manual
   stage: full-fat
-#  extends: .half_fat_before_script
+  extends: .half_fat_before_script
   image: lb584/ews_coordinator:latest
   tags: ["ewas-production"]
   script:
@@ -147,7 +148,7 @@ full_fat_tests:
 
       #echo "this is a manual job"
     
-      #cd $CI_PROJECT_DIR/tests/integration/full/
+      cd $CI_PROJECT_DIR/tests/integration/full/
 
       #ls