Explore projects

This repository contains the data and code associated with image analysis in the manuscript Simon et. al., (2025) Suppression of ERK signalling promotes pluripotent epiblast in the human blastocyst.

Scripts for SMT trajectory analysis in 'Changes in searching behaviour of CSL complexes in Notch active conditions'.

https://ctr.uniofcam.dev/ctr-bioinformatics/niakan-lab/kkn21_sbrumm_001

Exhaustive search model selection method using a parallel computing mechanism.

Configuration files for Canto to support PDN

Scripts of Cortijo et al., Widespread inter-individual gene expression variability in Arabidopsis thaliana. 2018

Analysis and simluation code for Abley & Formosa 2020