Explore projects

Software and scripts as described in the manuscript "High-throughput 3D Phenotyping of Plant Shoot Apical Meristems from tissue-resolution data"

Files associated with the Schwall et al. 2021 Molecular Systems Biology paper.

Project code for Gould et al., 2018, "Coordination of robust single cell rhythms in the Arabidopsis circadian clock".

Stochastic pulsing of gene expression enables the generation of spatial patterns in Bacillus subtilis biofilms

Data for Figure 2 from Patange et al. 2018

Project data and code for Greenwood et al., 2019, "Coordinated circadian timing through the integration of local inputs in Arabidopsis thaliana".

Scripts of Cortijo et al., Widespread inter-individual gene expression variability in Arabidopsis thaliana. 2018

Project code for Greenwood et al., "A spatial model of the plant circadian clock reveals design principles for coordinated timing".

Analysis and simluation code for Abley & Formosa 2020

Perl script to sync SQL or LDAP queries to Mailman or Sympa, but keep a record of what we did so that changes made outside the query sync are not overwritten

Script to interact with bugtiply using a kinect sensor

Library for reading and processing network configuration inventory.

Cookiecutter template for a Django Application