Explore projects

Mirror a container image to GCP.

Local fork of an ansible role for configuring kernel/system tunables. Repository managed By Terraform

My stupid little Arches log viewer

An attempt to gather links to the University of Cambridge computing history.

End User Documentation

Miscellaneous scripts etc from http://ssb22.user.srcf.net

Scripts and software connected to the publication Gruel, Deichmann, Landrein, Hitchcock and Jönsson (2018) "The interaction of transcription factors controls the spatial layout of plant aerial stem cell niches"

Code for simulations of individual Microtubules in 3D and constrained by a meshed description of a cell membrane.

Scripts and software connected to the publication Landrein et al (2018) "Nitrate modulates stem cell dynamics in Arabidopsis shoot meristems through cytokinins"

Model files for simulations in the publication Caggiano et al (2017) "Cell type boundaries organize plant development"

Apple JavaScript Automation based printer installer

Scripts to create printers for Print Deploy using supplied csv config file.

MATLAB code for running the simulations for the paper "Auxin transport model for leaf venation".

Scripts for producing the results in the paper "Cell size and growth regulation in the Arabidopsis thaliana apical stem cell niche"

Graduated Interval Recall program http://ssb22.user.srcf.net/gradint

An interactive evolutionary simulation demonstrating plant-like growth through genetic regulation and resource competition. Runs in the browser and terminal, allowing users to explore the impact of mutations, selection, and environmental factors on virtual plant development

Files connected to the publication A Rate Equation Approach to Elucidate the Kinetics and Robustness of the TGF-β Pathway.

Files and software connected to the publication Yang et al 2021