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Created with Raphaël 2.2.028Dec2221151287530Nov27232220161596131Oct19181711105429Sep282726251918430Aug25222116111092131Jul2621181714105428Jun201914129865131May3019121110543227Apr262417141224Mar2322201615142123Feb149732131Jan30272624121119Dec168730Nov2423211615141198743131Oct28272624201810329Sep282726201413631Aug3025242319181716151293227Jul26430Jun29merging changes from mainadding branch param to gitlab ciadding branch param to gitlab cimaking surveys file match main branchadding -l option to useraddchanging build file to include new dependenciesswapping test dates backmore work wiring in nc files as outputfix: More robust search for past survey downloadsgroundwork for using tifs/netcdf throughout the pipeline.typo: missing suffixfix: missing columns in the ODK form. This just a quick fix. It needs longterm solution!fix: Smaller survey test data filetest: More robust survey test data.groundwork for using tifs/netcdf throughout the pipeline.Merge remote-tracking branch 'origin/main' into maingroundwork for using tifs/netcdf throughout the pipeline.feat: Advisory depends on success of earlier jobsfeat: netCDF4 handling tools:chore: Reflect epi model bug fixmore instruction workmore instruction workmore instruction workmore instruction workupdating build templates and instructionsMerge branch 'main' of gitlab.developers.cam.ac.uk:gilligan-epid/wheat-rusts/ews-coordinator into mainfixing pathsupdating build templatefixing full-fat epi test to work with new fast versionremoving redundant calls to Extract (will delete this code in due course)making json file a bit clearerdocs: Some extra logging in epi processorfix: Residual indentation issuedocs: Extra notes on continue runsrefactor: Top-level continue argument for epi procrefactor: Move some epi prep to EpiPrep submodulefeat: Prepare past epi job for a continue runrefactior: Adaptable query of past job successesadding useful bash alias to dockerfileremoving redundant config