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Created with Raphaël 2.2.03Sep230Aug292723151413129131Jul292218161512111095226Jun2524212019181030May2924232221201716141310983129Apr221716151210985428Mar26215129Feb28271413752131Jan3025242322191612108543229Dec282221151287530Nov27232220161596131Oct19181711105429Sep282726251918430Aug25222116111092131Jul2621181714105428Jun201914129865131May3019121110543227Apr262417141224Mar2322201615142123Febgetting ready for full epi-fit on prod server.restoring long date formatno longer writing the component name (Epidemiology) to the epi outputsextracting functions to allow the ews job dir and the config dict to be created without needing to run the pipeline - allows epi fitting to retrieve these values if the peipeline has already runspecifying seaborn versionrestoring test run defaultsmaking tests workmaking tests workmaking tests workmodifting config file names for epi fit jobadding new params to test configsadding new fit_lb584 to work as part of the production code (long way to go)minor tidyingmaking the running of epi plotting dependant on whether config had been provided. Modifying tests to stop using epi outputs which are no longer includeddropping the return of plotting outputs as not needed now we use workflow managerrestoring "always" for half fat testsupdating commentsremoving code that allows multiple configs top be passed from the command line as no longer neededrenaming variables, particularly the 'configjson' which is a dict, not a stringadding correct output artifactchanging namefixing formatputting outputs of epi_fit in the projects dir to be bundled as an assetchanging config fileadding new reuirement for epi_fitrunning command from new locationtrying to add log file collectionremoving auto run of half fat for a whileadding epi-fit task (early work)tests: Update config to use ews-advisory-builder commit 878b104comment updatefix: Handle different dates for start of epi model season and simulationdoc updates for new python env for ews-browserdoc formattingtest commitupdating docsremoving files committed in errorremoving redundant conda configMerge branch 'main' of gitlab.developers.cam.ac.uk:gilligan-epid/wheat-rusts/ews-coordinator into mainchanges to desktop configs