- Direct call to perl script, instead of using preceding bash script to determine logfile, in perl directing with $logFH and $projectlogFH;
- logging and email of errors can happen before command-line options are parsed, with handleEarlyError();
- Mandatory command-line argument for config file, where required contents are checked;
- Optional arguments for emailing, uploading, downloading, verbose messaging, and running alternative date;
- alternative date is checked for consistent formatting and value;
- list of addresses to email can now be optionally provided in config file.

Moved this coordinator project to a general directory, and project-specific work to their own directory.

Providing configuration on initial command line call. This is passed to *Cron.sh scripts which pass it on to *Processor.pl scripts. Example crontab lines provided for SouthAsia project. New ProjectConfig.pl files can be created by user.

More explicit check of previous ODK downloads for success. This way, warning message and maxLookbackDays don't just succeed at first useable SurveyData.csv file, instead they point to when the data was downloaded.

Survey processor generates warning file for re-used old database download, not just a warning email.

Merged master branch with generalised. Note that Survey processing is generalised, but ENV and NAME still need to be finished.

When ODK server is down, clearer warning and instead copies previous download, instead of copying result of clustering. Also, better handling of warnings.

Modifying ProjectConfig.pl and providing configs for the two planned projects, Ethiopia and SouthAsia.

Provided configurable option to copy a fixed file of survey data, instead of querying and copying from ODK.

More reliable loading of ProjectConfig.pl into perl scripts. Now expects to find config in the same directory as perl scripts.

Generalised the shell scripts called by cron. These now determine project path from where the script is sitting.

Specifying new R package setup in environmental suitability plotting, and tidying up a variable from testing.

One package for R clustering was broken by plotting development. Temporary solution: it is provided in ewsmanager user home space and is provided by R_LIBS. Change in deposition may not be necessary. Intended long-term solution yet to be implemented: provide separate environment for R and its packages for each module of EWS.

Merge branch 'master' of http://pine--is.grid.private.cam.ac.uk:8888/gitlab/rs481/Ethiopia-EWS-Coordinator