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Gilligan Lab for Epidemiology and Modelling
Wheat rusts
ews-coordinator
Commits
ae662205
Commit
ae662205
authored
3 years ago
by
J.W. Smith
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docs: Updated crontab to latest live format
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fbda7567
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crontab.txt
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ae662205
# m h dom mon dow command
### Ethiopia
# ##############
# EWS-Coordinator
# ##############
# Source calculation from surveys
# ==========
# Ethiopia
# ==========
# ----------
# Surveys
# ----------
# source calculation from surveys
00 23 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Survey -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_fc_live.json --islive
# NAME Deposition forecast
# ----------
# NAME Deposition
# ----------
# forecast
15,45 09-22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_fc_live.json --islive
# Environmental suitability forecast (less frequent on Wednesday)
# analysis (Wednesday, dated for previous week)
25,55 14-22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
# ----------
# Environmental suitability
# ----------
# forecast (fewer scheduled for Wednesday)
30 9,11,13,15,17,19,21 * * 0-2,4-6 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_fc_live.json --islive
30 9,1
1,13,15
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_fc_live.json --islive
30 9,1
3
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_fc_live.json --islive
#
NAME Deposition
analysis (Wednesday
only)
25,55 14-22
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p
Deposition
-c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_an_live.json --islive
# analysis (Wednesday
, dated for previous week) needs 2hrs
00 17,21
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p
Environment
-c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_an_live.json --islive
-s `date +\%Y\%m\%d --date '-7 day'`
# Environmental suitability analysis (Wednesday only)
30 17,19,21 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_Ethiopia_an_live.json --islive
# ----------
# Epi model
# ----------
### South Asia
# old calling method
#00 17 * * * /storage/app/EWS/General/EWS-EpiModel/run_EpiProcess.sh --islive -c /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_stripe_env2p0.json
# new calling method
00 17 * * * /storage/app/EWS/General/EWS-Coordinator-Dev/run_Processor.sh -p Epidemiology -c /storage/app/EWS/General/EWS-Coordinator-Dev/configs/config_Ethiopia_fc_live.json --islive
# ==========
# South Asia
# ==========
# ----------
# Surveys
# ----------
# check for scraped media reports (Monday only)
00 12 * * 1 /storage/app/EWS/General/EWS-Coordinator/run_GatherScrapedMediaReports.sh
#
S
ource calculation from surveys
#
s
ource calculation from surveys
55 22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Survey -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_fc_live.json --islive
# NAME Deposition forecast
00,30 09-22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_fc_live.json --islive
# ----------
# NAME Deposition
# ----------
# Environmental suitability forecast (less frequent on Wednesday)
# forecast
00,30 09-22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_big_live.json --islive
# analysis (Wednesday, dated for previous week)
10,40 14-22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
# ----------
# Environmental suitability
# ----------
# forecast (larger region run on Wednesdays)
00 10,12,14,16,18,20,22 * * 0-2,4-6 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_fc_live.json --islive
00 10,1
2,14,16
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_
fc
_live.json --islive
00 10,1
4
* * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_
big
_live.json --islive
# NAME Deposition analysis (Wednesday only)
10,40 14-22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_an_live.json --islive
# analysis (Wednesday, dated for previous week) needs 2hrs
00 19,23 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
# ----------
# Epi model
# ----------
# forecast (larger region run on Wednesdays)
#00 16 * * 0-2,4-6 /storage/app/EWS/General/EWS-EpiModel/run_EpiProcess.sh --islive -c /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_stripe_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_stripe_env2p0.json
00 16 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Epidemiology -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_big_live.json --islive
# ----------
# Summary report
# ----------
# every Monday for Bangladesh and Wednesday for Nepal
00 17 * * 1 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_fc_live.json --islive
00 17 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_big_live.json --islive
# Environmental suitability analysis (Wednesday only)
00 18,20,22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/General/EWS-Coordinator/configs/config_SouthAsia_an_live.json --islive
# check for scraped media reports (Monday only)
00 12 * * 1 /storage/app/EWS/General/EWS-Coordinator/run_GatherScrapedMediaReports.sh
\ No newline at end of file
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