adding runner scripts for all processor components

scripts/run_Advisory_Processor.sh

+
+# get path of this script (to point to files within the same git repo)
+proc_path="$(dirname "$(readlink -f "$0")")"
+
+source "${proc_path}"/run_utils.sh
+
+setup_conda_env
+
+python "${proc_path}"/../coordinator/ProcessorAdvisory.py "$@"
+exit_code=$?
+
+teardown_conda_env
+
+exit $exit_code

scripts/run_Depo_Processor.sh → scripts/run_Deposition_Processor.sh

@@ -6,8 +6,6 @@ source "${proc_path}"/run_utils.sh
 
 setup_conda_env
 
-
-# run the processor with all arguments
 python "${proc_path}"/../coordinator/ProcessorDeposition.py "$@"
 exit_code=$?
 

scripts/run_Environment_Processor.sh

+
+# get path of this script (to point to files within the same git repo)
+proc_path="$(dirname "$(readlink -f "$0")")"
+
+source "${proc_path}"/run_utils.sh
+
+setup_conda_env
+
+python "${proc_path}"/../coordinator/ProcessorEnvironment.py "$@"
+exit_code=$?
+
+teardown_conda_env
+
+exit $exit_code

scripts/run_Epidemiology_Processor.sh

+
+# get path of this script (to point to files within the same git repo)
+proc_path="$(dirname "$(readlink -f "$0")")"
+
+source "${proc_path}"/run_utils.sh
+
+setup_conda_env
+
+python "${proc_path}"/../coordinator/ProcessorEpidemiology.py "$@"
+exit_code=$?
+
+teardown_conda_env
+
+exit $exit_code

scripts/run_Scraper_Processor.sh

+
+# get path of this script (to point to files within the same git repo)
+proc_path="$(dirname "$(readlink -f "$0")")"
+
+source "${proc_path}"/run_utils.sh
+
+setup_conda_env
+
+python "${proc_path}"/../coordinator/ProcessorScraper.py "$@"
+exit_code=$?
+
+teardown_conda_env
+
+exit $exit_code

scripts/run_Survey_Processor.sh

+
+# get path of this script (to point to files within the same git repo)
+proc_path="$(dirname "$(readlink -f "$0")")"
+
+source "${proc_path}"/run_utils.sh
+
+setup_conda_env
+
+python "${proc_path}"/../coordinator/ProcessorSurvey.py "$@"
+exit_code=$?
+
+teardown_conda_env
+
+exit $exit_code