feat: convert severity string values to int

coordinator/ProcessorSurveysnewODK.py

@@ -33,6 +33,21 @@ cases_incident = {
     'high':'high'
     }
 
+cases_severity = {
+    '1':1,
+    '5':5,
+    '10':10,
+    '15':15,
+    '20':20,
+    '30':30,
+    '40':40,
+    '50':50,
+    '60':60,
+    '70':70,
+    '80':80,
+    '80+':80,
+    }
+
 def get_from_kobotoolbox(url,form_id,form_token,**kwargs):
     '''Make the HTTP request, then checking the status code.'''
 
@@ -109,7 +124,7 @@ def get_newODK_form_as_csv(form_credentials: dict, jobPath: str, config: dict, s
         'imei' : 'imei',
         'leaf_rust/leafrust_host_plant_reaction' : 'leaf_rust-leafrust_host_plant_reaction',
         'leaf_rust/leafrust_incidence' : ('parse_cases',(('name_out','leaf_rust-leafrust_incidence'),('cases', cases_incident))),
-        'leaf_rust/leafrust_severity' : 'leaf_rust-leafrust_severity',
+        'leaf_rust/leafrust_severity' : ('parse_cases',(('name_out','leaf_rust-leafrust_severity'),('cases', cases_severity),('dtype', int))),
         'live_leafrust_samples' : 'SET-OF-live_leafrust_samples',
         'live_leafrust_samples_count' : 'live_leafrust_samples_count',
         'live_stemrust_samples' : 'SET-OF-live_stemrust_samples',
@@ -127,7 +142,7 @@ def get_newODK_form_as_csv(form_credentials: dict, jobPath: str, config: dict, s
         'site_information/survey_site' : 'site_information-survey_site',
         'site_information/variety' : 'site_information-variety',
         'start' : ('parse_date',(('name_out','start'),('fmt_in','%Y-%m-%dT%H:%M:%S.%f%z'))),
-        'stem_rust/Stemrust_severity' : 'stem_rust-Stemrust_severity',
+        'stem_rust/Stemrust_severity' : ('parse_cases',(('name_out','stem_rust-Stemrust_severity'),('cases', cases_severity),('dtype', int))),
         'stem_rust/stemrust_host_plant_reaction' : 'stem_rust-stemrust_host_plant_reaction',
         'stem_rust/stemrust_incidence' : ('parse_cases',(('name_out','stem_rust-stemrust_incidence'),('cases', cases_incident))),
         'survey_infromation/location' : ('parse_location_kobotoolbox',()),
@@ -139,8 +154,8 @@ def get_newODK_form_as_csv(form_credentials: dict, jobPath: str, config: dict, s
         'today' : ('parse_date',(('name_out','today'),('fmt_in','%Y-%m-%d'))),
         'username' : 'username',
         'yellow_rust/yellowrust_host_plant_reaction' : 'yellow_rust-yellowrust_host_plant_reaction',
-        'yellow_rust/yellowrust_incidence' : ('parse_cases',(('name_out','leaf_rust-leafrust_incidence'),('cases', cases_incident))),
-        'yellow_rust/yellowrust_severity' : 'yellow_rust-yellowrust_severity',
+        'yellow_rust/yellowrust_incidence' : ('parse_cases',(('name_out','yellow_rust-yellowrust_incidence'),('cases', cases_incident))),
+        'yellow_rust/yellowrust_severity' : ('parse_cases',(('name_out','yellow_rust-yellowrust_severity'),('cases', cases_severity),('dtype', int))),
         }
 
     logger.debug('Performing download')