adding asserts for the epi test - commenting the bit that runs the actual code back in!

tests/integration/test_epi.py

@@ -14,8 +14,8 @@ class TestEpi(unittest.TestCase):
     @classmethod
     def setUpClass(cls) -> None:
         TestEpi.write_temp_run_config_files()
-        # TestEpi.unpack_dependencies()
-        # TestEpi.run_epi_pipeline()
+        TestEpi.unpack_dependencies()
+        TestEpi.run_epi_pipeline()
 
 
     @staticmethod