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Gilligan Lab for Epidemiology and Modelling
Wheat rusts
ews-coordinator
Commits
15b4dd51
Commit
15b4dd51
authored
2 years ago
by
L. Bower
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removing R from docker image
parent
b842a3bb
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configs/docker/build/Dockerfile
+5
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configs/docker/build/Dockerfile
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configs/docker/build/Dockerfile
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View file @
15b4dd51
...
@@ -18,13 +18,13 @@ RUN echo "alias e='emacs -nw $1'" >> ~/.bashrc;
...
@@ -18,13 +18,13 @@ RUN echo "alias e='emacs -nw $1'" >> ~/.bashrc;
RUN
DEBIAN_FRONTEND
=
noninteractive
TZ
=
Etc/UTC apt-get
-y
install
tzdata
RUN
DEBIAN_FRONTEND
=
noninteractive
TZ
=
Etc/UTC apt-get
-y
install
tzdata
#build R
#build R
RUN
wget
--quiet
https://cran.r-project.org/src/base/R-3/R-3.5.1.tar.gz
-O
/usr/local/R-3.5.1.tar.gz
#
RUN wget --quiet https://cran.r-project.org/src/base/R-3/R-3.5.1.tar.gz -O /usr/local/R-3.5.1.tar.gz
RUN
tar
-zxvf
/usr/local/R-3.5.1.tar.gz
-C
/usr/local/
#
RUN tar -zxvf /usr/local/R-3.5.1.tar.gz -C /usr/local/
RUN
mv
/usr/local/R-3.5.1 /usr/local/R
#
RUN mv /usr/local/R-3.5.1 /usr/local/R
RUN
cd
/usr/local/R/
;
./configure
--with-readline
=
no
--with-x
=
no
;
make
#
RUN cd /usr/local/R/;./configure --with-readline=no --with-x=no;make
#install R packages
#install R packages
RUN
/usr/local/R/bin/Rscript installRPackages.txt
;
#
RUN /usr/local/R/bin/Rscript installRPackages.txt;
# Install miniconda
# Install miniconda
ENV
CONDA_DIR /storage/app/miniconda3
ENV
CONDA_DIR /storage/app/miniconda3
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