FAQ | This is a LIVE service | Changelog

Skip to content
Snippets Groups Projects
Commit 0f8c1e13 authored by Dr T. Mona's avatar Dr T. Mona
Browse files

fix: handle KEY columns

parent dba46b94
No related branches found
No related tags found
No related merge requests found
......@@ -104,6 +104,7 @@ def nested_to_flattened(df):
'Rust Details',
'Other Disease',
'Sample Details',
'Survey Details.Survey No',
'Survey Details.Latitude',
'Survey Details.First Rust Observation Date',
'Survey Details.Longitude',
......@@ -163,7 +164,6 @@ def nested_to_flattened(df):
'live_stemrust_samples_count',
'dead_yellowrust_samples_count',
'SET-OF-live_leafrust_samples',
'KEY',
'other_diseases_group-other_diseases',
'survey_infromation-location-Altitude',
'SET-OF-dead_stemrust_samples',
......@@ -178,9 +178,6 @@ def nested_to_flattened(df):
for i in NEW_COLUMNS:
df[i] = ""
#TODO: replace with a better KEY column
df["KEY"] = df.index
# add dedicated rust columns, with default values
NEW_RUST_COLUMNS = {"Stem Rust.Incident":"none","Stem Rust.Severity":"-9","Stem Rust.Reaction":"na",
"Leaf Rust.Incident":"none","Leaf Rust.Severity":"-9","Leaf Rust.Reaction":"na",
......@@ -221,6 +218,7 @@ def get_WRSIS_form_as_csv(form_credentials: dict, jobPath: str, config: dict, st
'Rust Details' : 'None',
'Other Disease' : 'None',
'Sample Details' : 'None',
'Survey Details.Survey No' : 'KEY',
'Survey Details.Latitude' : 'survey_infromation-location-Latitude',
'Survey Details.First Rust Observation Date' : 'None',
'Survey Details.Longitude' : 'survey_infromation-location-Longitude',
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment