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Commit 02267e06 authored by L. Bower's avatar L. Bower
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more Docker updates

parent d74904dd
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......@@ -4,15 +4,15 @@ FROM ubuntu:18.04
#create dirs
WORKDIR /home
RUN mkdir /home/code
RUN mkdir -p /storage/app/EWS/Ethiopia/Workspace
RUN mkdir -p /storage/app/EWS/SouthAsia/Workspace
RUN mkdir -p /storage/app/EWS_prod/regions/EastAfrica/workspace
RUN mkdir -p /storage/app/EWS_prod/regions/SouthAsia/workspace
#copy resources in
COPY ./installRPackages.txt /home
COPY ./conda-env-py3EWS-withbuilds.yml .
#install system packages
RUN apt-get update;apt-get install --assume-yes wget emacs gdal-bin libgdal-dev build-essential gfortran zlib1g zlib1g-dev libbz2-dev apt-utils liblzma-dev libpcre++-dev libcurl4-openssl-dev default-jre lib32readline7 lib32readline6-dev openssh-server;
RUN apt-get update;apt-get install --assume-yes wget emacs gdal-bin libgdal-dev build-essential gfortran zlib1g zlib1g-dev libbz2-dev apt-utils liblzma-dev libpcre++-dev libcurl4-openssl-dev default-jre lib32readline7 lib32readline6-dev openssh-server libfribidi-dev libfontconfig1-dev;
RUN echo "alias e='emacs -nw $1'" >> ~/.bashrc;
#sets the timezone to London
RUN DEBIAN_FRONTEND=noninteractive TZ=Etc/UTC apt-get -y install tzdata
......@@ -34,7 +34,7 @@ RUN /bin/bash ~/miniconda.sh -b -p $CONDA_DIR
ENV PATH=$CONDA_DIR/bin:$PATH
#build the conda env(s)
RUN conda env create --file conda-env-py3EWS-withbuilds.yml --prefix /storage/app/EWS/envs/conda/py3EWS
RUN conda env create --file conda-env-py3EWS-withbuilds.yml --prefix /storage/app/EWS_prod/envs/conda/py3EWS
#tidy
RUN rm -v ~/miniconda.sh conda-env-py3EWS-withbuilds.yml;
\ No newline at end of file
install.packages(c("devtools", "dplyr"), repos='http://cran.us.r-project.org')
install.packages("devtools", repos='http://cran.us.r-project.org')
install.packages("dplyr", repos='http://cran.us.r-project.org')
require(devtools)
install_version("readr", version="1.1.1", repos="http://cran.us.r-project.org")
install_version("rprojroot", version="1.3-2", repos="http://cran.us.r-project.org")
......
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