Merge branch 'release/4.0.0'
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- bitbucket-pipelines.yml 3 additions, 3 deletionsbitbucket-pipelines.yml
- pom.xml 127 additions, 99 deletionspom.xml
- ssip-core/pom.xml 1 addition, 1 deletionssip-core/pom.xml
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/Atom.java 3 additions, 4 deletions...ore/src/main/java/uk/ac/cam/ch/hunter/ssip/core/Atom.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/CentroidCalculator.java 2 additions, 2 deletions...ava/uk/ac/cam/ch/hunter/ssip/core/CentroidCalculator.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/MEPPoint.java 2 additions, 4 deletions...src/main/java/uk/ac/cam/ch/hunter/ssip/core/MEPPoint.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/cml/CmlMolecule.java 8 additions, 2 deletions...n/java/uk/ac/cam/ch/hunter/ssip/core/cml/CmlMolecule.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/cml/io/CMLReader.java 1 addition, 1 deletion.../java/uk/ac/cam/ch/hunter/ssip/core/cml/io/CMLReader.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/io/SSIPWriter.java 1 addition, 1 deletion...ain/java/uk/ac/cam/ch/hunter/ssip/core/io/SSIPWriter.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/io/SchemaMaker.java 1 addition, 1 deletion...in/java/uk/ac/cam/ch/hunter/ssip/core/io/SchemaMaker.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/io/SsipMoleculeReader.java 1 addition, 1 deletion.../uk/ac/cam/ch/hunter/ssip/core/io/SsipMoleculeReader.java
- ssip-core/src/main/java/uk/ac/cam/ch/hunter/ssip/core/pointcloud/Point3D.java 4 additions, 4 deletions...ava/uk/ac/cam/ch/hunter/ssip/core/pointcloud/Point3D.java
- ssip-footprint/pom.xml 1 addition, 1 deletionssip-footprint/pom.xml
- ssip-footprint/src/main/java/uk/ac/cam/ch/hunter/ssip/footprint/Molecule.java 1 addition, 1 deletion...ain/java/uk/ac/cam/ch/hunter/ssip/footprint/Molecule.java
- ssip-footprint/src/main/java/uk/ac/cam/ch/hunter/ssip/footprint/cli/FootPrintCli.java 5 additions, 61 deletions.../uk/ac/cam/ch/hunter/ssip/footprint/cli/FootPrintCli.java
- ssip-footprint/src/main/java/uk/ac/cam/ch/hunter/ssip/footprint/cli/FootprintOptionParser.java 61 additions, 0 deletions...m/ch/hunter/ssip/footprint/cli/FootprintOptionParser.java
- ssip-footprint/src/main/java/uk/ac/cam/ch/hunter/ssip/footprint/io/PDBReader.java 3 additions, 3 deletions...java/uk/ac/cam/ch/hunter/ssip/footprint/io/PDBReader.java
- ssip-phasetransfer/pom.xml 1 addition, 5 deletionsssip-phasetransfer/pom.xml
- ssip-phasetransfer/src/main/java/uk/ac/cam/ch/hunter/ssip/phasetransfer/AssociationConstants.java 5 additions, 5 deletions...am/ch/hunter/ssip/phasetransfer/AssociationConstants.java
- ssip-phasetransfer/src/main/java/uk/ac/cam/ch/hunter/ssip/phasetransfer/AssociationConstantsFactory.java 19 additions, 35 deletions...unter/ssip/phasetransfer/AssociationConstantsFactory.java
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