pre-commit checks

Description

Add python devops standard pre-commit checks, etc. (e.g. black, isort, etc) and perform a one-time autofix.

If checks can't be auto-fixed or manually fixed within 30 mins, disable the check.

Acceptance Criteria

• checks added
• checks run in CI using standard gitlab pipeline
• config, auto-fixes and manual fixes are 3 (or more) separate commits