From 41fffaf3a7e4521489292903357f40b5202faa27 Mon Sep 17 00:00:00 2001
From: Vitor Trovisco <vmt25@cam.ac.uk>
Date: Thu, 21 Oct 2021 12:21:40 +0000
Subject: [PATCH] Update canto_deploy.yaml - commenting out the session
 track>report sections for pheno_anat, pheno_chem, pheno_dataset and low
 priority, so that they do not show in  the Admin page >  tree report

---
 canto_deploy.yaml | 92 +++++++++++++++++++++++------------------------
 1 file changed, 46 insertions(+), 46 deletions(-)

diff --git a/canto_deploy.yaml b/canto_deploy.yaml
index a31f106..753fc67 100644
--- a/canto_deploy.yaml
+++ b/canto_deploy.yaml
@@ -21,7 +21,7 @@ Model::TrackModel:
     - dbi:SQLite:dbname=/data/track.sqlite3
   schema_class: Canto::TrackDB
 # filepath 
-data_directory: /data
+data_directory: data
 
 #Database to connect to - 'connect_info:' bit is the only part that needs changes on a weekly basis
 Model::ChadoModel:
@@ -1097,51 +1097,51 @@ reports:
                - report: pheno_publications_with_approved_sessions
                - report: pheno_publications_with_multiple_sessions
             - report: pheno_publications_without_sessions
-        - report: pheno_anat_publications
-          children:
-            - report: pheno_anat_publications_with_sessions
-              children:
-               - report: pheno_anat_publications_with_new_sessions
-               - report: pheno_anat_publications_with_active_sessions
-               - report: pheno_anat_publications_with_approved_sessions
-               - report: pheno_anat_publications_with_multiple_sessions
-            - report: pheno_anat_publications_without_sessions
-        - report: pheno_chem_publications
-          children:
-            - report: pheno_chem_publications_with_sessions
-              children:
-               - report: pheno_chem_publications_with_new_sessions
-               - report: pheno_chem_publications_with_active_sessions
-               - report: pheno_chem_publications_with_approved_sessions
-               - report: pheno_chem_publications_with_multiple_sessions
-            - report: pheno_chem_publications_without_sessions
-        - report: pheno_dataset_publications
-          children:
-            - report: pheno_dataset_publications_with_sessions
-              children:
-               - report: pheno_dataset_publications_with_new_sessions
-               - report: pheno_dataset_publications_with_active_sessions
-               - report: pheno_dataset_publications_with_approved_sessions
-               - report: pheno_dataset_publications_with_multiple_sessions
-            - report: pheno_dataset_publications_without_sessions
-        - report: low_priority_publications
-          children:
-            - report: low_priority_publications_with_sessions
-              children:
-               - report: low_priority_publications_with_new_sessions
-               - report: low_priority_publications_with_active_sessions
-               - report: low_priority_publications_with_approved_sessions
-               - report: low_priority_publications_with_multiple_sessions
-            - report: low_priority_publications_without_sessions
-        - report: training_publications
-          children:
-            - report: training_publications_with_sessions
-              children:
-               - report: training_publications_with_new_sessions
-               - report: training_publications_with_active_sessions
-               - report: training_publications_with_approved_sessions
-               - report: training_publications_with_multiple_sessions
-            - report: training_publications_without_sessions
+#       - report: pheno_anat_publications
+#          children:
+#            - report: pheno_anat_publications_with_sessions
+#              children:
+#               - report: pheno_anat_publications_with_new_sessions
+#               - report: pheno_anat_publications_with_active_sessions
+#               - report: pheno_anat_publications_with_approved_sessions
+#               - report: pheno_anat_publications_with_multiple_sessions
+#            - report: pheno_anat_publications_without_sessions
+#        - report: pheno_chem_publications
+#          children:
+#            - report: pheno_chem_publications_with_sessions
+#              children:
+#               - report: pheno_chem_publications_with_new_sessions
+#               - report: pheno_chem_publications_with_active_sessions
+#               - report: pheno_chem_publications_with_approved_sessions
+#               - report: pheno_chem_publications_with_multiple_sessions
+#            - report: pheno_chem_publications_without_sessions
+#        - report: pheno_dataset_publications
+#          children:
+#            - report: pheno_dataset_publications_with_sessions
+#              children:
+#               - report: pheno_dataset_publications_with_new_sessions
+#               - report: pheno_dataset_publications_with_active_sessions
+#               - report: pheno_dataset_publications_with_approved_sessions
+#               - report: pheno_dataset_publications_with_multiple_sessions
+#            - report: pheno_dataset_publications_without_sessions
+#        - report: low_priority_publications
+#          children:
+#            - report: low_priority_publications_with_sessions
+#              children:
+#               - report: low_priority_publications_with_new_sessions
+#               - report: low_priority_publications_with_active_sessions
+#               - report: low_priority_publications_with_approved_sessions
+#               - report: low_priority_publications_with_multiple_sessions
+#            - report: low_priority_publications_without_sessions
+#        - report: training_publications
+#          children:
+#            - report: training_publications_with_sessions
+#              children:
+#               - report: training_publications_with_new_sessions
+#               - report: training_publications_with_active_sessions
+#               - report: training_publications_with_approved_sessions
+#               - report: training_publications_with_multiple_sessions
+#            - report: training_publications_without_sessions
     - report: all_sessions
       children:
         - report: approved_sessions
-- 
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