diff --git a/pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json b/pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json index 9b00940e79ce5151988896e306acfbe727d44866..dc39ed0fe12cc4436f68ad6baaf1f7e0828ad850 100644 --- a/pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json +++ b/pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json @@ -11,27 +11,50 @@ [ "AAAFC CANADA#162" ], - "Alidoro": + "Adaptation trial plot #11": [ - "Alidoro" + "Adaptation trial plot#11" + ], + "Abay": + [ + "Abay" + ], + "Alidoro": + [ + "Alidoro", + "Alido" ], "Amibara 2": [ - "Amibara_2" + "Amibara_2", + "Amibara2" + ], + "Balcha": + [ + "Balcha" + ], + "Biftu": + [ + "Biftu" ], - "Boru": + "Boru": [ "Boru" ], - "Bulala": + "Bulala": + [ + "Bulala", + "Bullala" + ], + "Candidate varity VVT": [ - "Bulala" + "Candidate varity VVT" ], - "CD 21 #16815": + "CD 21 #16815": [ "CD 21 # 16815" ], - "CD 21 #16296": + "CD 21 #16296": [ "CD 21 #16296" ], @@ -39,25 +62,30 @@ [ "CD22#761 -ELTSR" ], - "Daka": + "Daka": [ "Daka", - "Deka" + "Deka", + "DAKA", + "Daka " ], - "Dambal": + "Dambal": [ "Dambal", - "Dambel" + "Dambel", + "Danbal" ], - "Damphe": + "Damphe": [ "Damphe", "Danfe", "Denfe" ], - "Danda'a": + "Danda'a": [ "Danda'a", + "Danda'a ", + "Danda", "danda'", "danda'a", "Danda,a", @@ -72,34 +100,58 @@ "Dende'a", "Dendea", "Dendy", - "Debdea" - ], - "Db1899": + "Debdea", + "Denidea", + "Danada'a", + "Dandaya", + "Dehnadea", + "Danadaha", + "Deamda", + "Denda'a ", + "Danda’", + "Dendáa", + "Dandaa", + "Damda'a", + "Damdaha" + ], + "Db1899": [ "Db1899" ], - "Deneba": + "Deneba": [ "Deneba" ], - "Digalu": + "Dersolgn": + [ + "Dersolgn" + ], + "Digalu": [ "Digalu", - "Digelu" + "Digelu", + "Degelu" ], "Duma": [ - "Duma" + "Duma", + "Duma ", + " Duma" ], - "Durum CD21 ELTSR #1382": + "Durum CD21 ELTSR #1382": [ "Durum CD21 ELTSR#1382" ], - "Eagle 10": + "Dursa": + [ + "Dursa", + "Dursaa" + ], + "Eagle 10": [ "Eagle 10" ], - "Eldo Baraka": + "Eldo Baraka": [ "Eldo Baraka" ], @@ -121,44 +173,44 @@ [ "ELITEBW-KENYA#21" ], - "Enikoy": + "Enikoy": [ "Enikoy", "Enkoy" ], - "EPCBW #122": + "EPCBW #122": [ "EPCBW#122", "EPCBW #122", "EPCBW #122" ], - "EPCBW #207": + "EPCBW #207": [ "EPCBW#207", "EPCBW #207", "EPCBW #207" ], - "EPCBW #320": + "EPCBW #320": [ "EPCBW#320", "EPCBW #320", "EPCBW #320" ], - "EPCBW #1002": + "EPCBW #1002": [ "EPCBW#1002", "EPCBW #1002", "EPCBW #1002" ], - "EPCHPLUS # KEN#58": + "EPCHPLUS # KEN#58": [ "EPCHPLUS # KEN#58" ], - "EPCHPLUS #154": + "EPCHPLUS #154": [ "EPCHPLUS#154" ], - "EPCHPLUS- KEN#120": + "EPCHPLUS- KEN#120": [ "EPCHPLUS- KEN#120" ], @@ -166,14 +218,14 @@ [ "EPCHPZN#11" ], - "Et 13": + "Et 13": [ "Et 13", "ET13", "Et13", "Ey13" ], - "ETHIOPIA #238": + "ETHIOPIA #238": [ "ETHIOPIA #238" ], @@ -193,7 +245,7 @@ [ "F2HPZN#38" ], - "F2HPLUS-KEN #111": + "F2HPLUS-KEN #111": [ "F2HPLUS-KEN #111" ], @@ -201,11 +253,11 @@ [ "F3BW#9" ], - "F3BW #360": + "F3BW #360": [ "F3BW #360" ], - "F3HPLUS- KEN #59": + "F3HPLUS- KEN #59": [ "F3HPLUS- KEN #59" ], @@ -213,7 +265,7 @@ [ "F3HPZN#59" ], - "F4 HPLUS KEN": + "F4 HPLUS KEN": [ "F4 HPLUS KEN" ], @@ -221,200 +273,336 @@ [ "F5RG#357" ], - "F5 RG BW (A) #73": + "F5 RG BW (A) #73": [ "F5 RG BW (A)#73" ], - "F5RG (A) #336": + "F5RG (A) #336": [ "F5RG (A)#336" ], - "F5RG (A) #757": + "F5RG (A) #757": [ "F5RG (A)#757" ], - "F5RG (B) #1026": + "F5RG (B) #1026": [ "F5RG (B) #1026" ], - "F5RGBW #181 (A)": + "F5RGBW #181 (A)": [ "F5RGBW#181 (A)" ], - "Farasi": + "Farasi": [ - "Farasi" + "Farasi", + "KS. Farasi" ], - "Farlly": + "Farlly": [ "Farlly" ], - "Fentale-2": + "Fentale-2": [ "Fentale-2", "Fentale_2" ], - "Galane": + "Galane": [ "Galane", - "Gelan" + "Gelan", + "Galan", + "Gelana" ], - "Genotypes": + "Ganda": + [ + "Ganda" + ], + "Gembo": + [ + "Gembo" + ], + "Genotypes": [ "Genotypes" ], - "Grace": + "Grace": [ "Grace" ], - "Hachalu": + "Hachalu": [ "Hachalu" ], - "Hidassie": + "Harato": + [ + "Harato" + ], + "Hawi": + [ + "Hawi" + ], + "HB13": + [ + "HB13" + ], + "Hidassie": [ "Hidassie", + "Hidassie ", "Hidasse", "Hidase", "Hidasie", "hidassie", "Hiddasie", "Hisasie", - "Hisasse" + "Hisasse", + "Hiddase", + "Hidassee" ], - "HR1685": + "Hoggana": + [ + "Hoggana" + ], + "HR1685": [ "HR1685" ], - "Huluka": + "Huluka": [ "Huluka", - "Huluqa" + "Huluqa", + "Hulaka", + "Hulka", + "Hululka", + "Buluka", + "Huluka " ], - "Hyrax": + "Hydero": + [ + "Hydero" + ], + "Hyrax": [ "Hyrax" ], - "Improved": + "Improved": [ "Improved" ], - "Iran#66": + "Iran#66": [ "Iran#66" ], - "Israel": + "Israel": [ "Israel" ], - "Jacana": + "Jacana": [ "Jacana", - "JACANA" + "JACANA", + "Jalane" ], - "K. Korongo": + "K. Kasuku": + [ + "Kenya Kasuku", + "Kenya Kasuku ", + "Kasuku", + "KASUKU", + "Kasuku", + " Kasuku", + "K.kasuku", + "K. kasuku", + "K .kasuku", + "K.Kasuku", + "K. Kasuku", + "K .Kasuku" + ], + "K. Korongo": [ "K. Korongo", "K. Korongo ", "Korongo", - "Korongo " - ], - "KS. Chui": + "Korongo ", + "K . Korongo", + "K. KORONGO", + "K.Korongo", + "K Korongo", + "K Korongo ", + "Kenya Korongo", + "Kenya Korongo ", + "K .Korongo", + "K.korongo" + ], + "KS. Chui": [ "Chui", "KS. Chui", + "KS Chui", "KS.CHUI", - "KS.Chui" + "KS.Chui", + "KS. Chui", + "Ks. Chui", + "Ks.Chui", + "Ks.Chui " + ], + "KS. Farasi": + [ + "KS Farasi", + "KS. Farasi" + ], + "KS. Kanga": + [ + "Kanga", + " Kanga", + "KS. Kanga", + "Ks. Kanga" ], - "K624A": + "KS. Ndume": + [ + "Ndume", + "Ks. Ndume", + "KS. Ndume", + "Ks. Ndume ", + "KS. Ndume ", + "Ks.Ndume", + "KS.Ndume" + ], + "KS. Mwamba": + [ + "KS Mwamba ", + "KS.MWAMBA", + "Ks.Mwamba" + ], + "K624A": [ "K624A", "K62 4A" ], - "K924A": + "K924A": [ "K924A" ], - "Kakaba": + "Kakaba": [ "Kakab", "Kakaba", + "Kakaba ", "Kekeaba", "Kekeb", "KEKEBA", "Kekeba", "kekeba", - "Kekebw" + "kakaba", + "Kekebw", + "Kekekeba", + "Kebeka" ], - "Kebaba": + "Kebaba": [ - "Kebaba" + "Kebaba", + "Kebab" ], - "Kenya Impala": + "Kenya Impala": [ "Kenya Impala" ], - "Kenya Kasuku": + "Kenya Jacana": [ - "Kenya Kasuku", - "Kasuku", - "KASUKU" + "Kenya Jacana" ], - "Kenya Pweza": + "Kenya Pweza": [ "Kenya Pweza" ], - "Kenya Turaco": + "Kenya Turaco": [ - "Kenya Turaco" + "Kenya Turaco", + "Kenya Turaco " ], - "Kenya wren": + "Kenya wren": [ "Kenya wren" ], - "Kingbird": + "Kingbird": [ "Kingbird", "King Bird", "King bird", - "Kingbirds" - ], - "Kubsa": + "Kingbirds", + "Kimgbard", + "Kinbird", + "Kingbard", + "Kingbird ", + "King be", + "King bir", + "KingBird", + "Kigbird", + "Kingbord", + "Kinberd", + "Kingberd", + "kingbird" + ], + "Kubsa": [ "Kubsa", "kubsa", - "Kubssa" + "Kubssa", + "Kubsa ", + "Kubsa (1685)", + "Kibsa" ], - "Kwale": + "Kwale": [ "Kwale", "Kwale " ], - "Lemu": + "Lemu": [ - "Lemu" + "Lemu", + "Limu" ], - "Liben": + "Liben": [ "Liben" ], - "Local": + "Local": [ "Local", - "From local market(Unknown)" + "Local ", + "From local market(Unknown)", + "Emer wheat local", + "local" + ], + "Mandoyu": + [ + "Mandoyu", + "Mandoyo" ], - "Mangudo": + "Mangudo": [ "Mangudo", - "mangudo" + "mangudo", + "Mangudo " ], - "Mixed": + "Mekale 02": + [ + "Mekale 02", + "Mekale 02 " + ], + "Miju": + [ + "Miju" + ], + "Mixed": [ "Mixed", "Digalu mixture with Hidasie", "Kingbird (mixed)", "mixed", "Mixed variety", + "Mixed hidase and danda'a", "Hidassie with danda'a", "Kingbird, wane ogolchoo", "israel+Et 13", @@ -429,18 +617,74 @@ "Mixed crop (Kwale& Njoro II )", "Mixed crop (Njoro II & KS.CHUI )", "Mixed crop (Njoro II & unknown )", - "Mixed crop (Njoro II& Korongo )" - ], - "Mwamba": + "Mixed crop (Njoro II& Korongo )", + "Mixed(Njoro II & Mwamba)", + "Mixed crop (Korongo &Njoro II )", + "Mixed crop (Ndume & Farasi)", + "Mixed crop (Njoro II & Mwamba )", + "Mixed crop (Njoro II & Farasi)", + "Mixed: Danda'a and Kakaba", + "Mixed varieties", + "Wane mixture", + "Dembel and Denda", + "Mixed ", + "Mixed (Korongo and old varieties )", + "Mixed (kasuku, Korongo )", + "Mixed (korongo, kasuku, old varieties)", + "Mixed crop ( Korongo & barley )", + "Mixed crop (Chui & Korongo )", + "Mixed crop (K . Korongo &Uknown )", + "Mixed crop (Korongo & Uknown)", + "Mixed crop( Njoro II, Korongo, old varieties )", + "Mixed crop(KingBird, Korongo )", + "Korongo & Njoro 2", + "Korongo& Eagle 10 (mixed )", + "Mixed (K. Korongo/barely)", + "Mixed (Robin, Korongo)", + "Mixed( Njoro 2 & Korongo)", + "Njoro 2 & Korongo", + "Korongo, Robin, Kwale", + "Mixed (Njoro II, Korongo )", + "Mixed (Korongo, ks chui)", + "Mixed (Njoro II, Korongo )", + "Mixed (Njoro II, Korongo)", + "Tallo diff#44,tallo diff#24,yr diff#4", + "Differentials", + "Kubsa + daka", + "Mixed (Korongo&Uknown)", + "Mixed varieties ( Korongo and KS Chui)", + "King bird ,limu and sofmer", + "Mixed crop (K.kasuku &K.Korongo. )", + "Mixed crop (K.korongo & Duma)", + "Mixed crop (K.korongo & duma)", + "Mixed crop (K.korongo & K. kasuku)", + "Mixed crop (K.korongo & K. kasuku. )", + "Mixed crop (K.korongo & Kasuku )", + "Mixed crop (K.korongo & uknown variety)", + "Mixed crop (K.Korongo & unknown )", + "Mixed crop (K.Korongo & unknown variety )", + "Mixed crop (K.korongo & unknown)", + "Mixed crop (K.Korongo &unknown )", + "Mixed crop (kwale &unknown )", + "Mixed crop (Njoro 2 & unknown )", + "Mixed crop (Njoroll & Korongo )", + "Mixed variety (K.Korongo and Kwale)", + "Uknown mixed crop" + ], + "Mulifa": + [ + "Mulifa" + ], + "Mwamba": [ "Mwamba" ], - "Ndume": + "Ndume": [ "Ndume", "Ndume " ], - "NJORO BW II": + "Njoro BW II": [ "NJORO BW II", "Njoro BW II", @@ -451,43 +695,69 @@ "NJORO BWIl ", "NjoroBWII", "NjoroBWII ", - "Njoro Il" + "Njoro II", + "Njoro II ", + "Njoro Il", + "Njoro Il ", + "Njoro ll", + "Njoro2", + "Njoro ll", + "Njoro ll", + "Njoroll", + "Njoro ll ", + "Njoroll " + ], + "Oat": + [ + "Oat" + ], + "Oborra": + [ + "Oborra" ], - "Ogolcho": + "Ogolcho": [ + "Ogolcho", + "Ogolcho ", + "ogolcho", + "Ogolccho", "Ogelcho", "Oglcho", "Ogocho", + "Ogoocho", "Ogol cho", "Ogolchi", "OGOLCHO", - "Ogolcho", - "ogolcho", "Ogolicho", "OGOLOCHO", "Ogilcho", "Ogolch", - "Ogolucho" + "Ogolucho", + "Ogolcha" ], - "One": + "One": [ "One" ], - "Otuba": + "Otuba": [ "Otuba", "Utuba" ], - "Paven 76": + "Paven 76": [ "Paven 76", "Paven76", "Pavo-76", "Pavon", "Pavan", - "Pavon_76" + "Pavon_76", + "Pavon 76", + "Pavon-76", + "pavan", + "Pavin" ], - "PCBW #560": + "PCBW #560": [ "PCBW# 560" ], @@ -495,7 +765,7 @@ [ "PCBW#1387" ], - "PCBW #1877": + "PCBW #1877": [ "PCBW#1877" ], @@ -507,15 +777,15 @@ [ "PCBW#4556" ], - "PCBWSR #2431": + "PCBWSR #2431": [ "PCBWSR#2431" ], - "PCBWSR #3421": + "PCBWSR #3421": [ "PCBWSR#3421" ], - "PCBWSR #4409": + "PCBWSR #4409": [ "PCBWSR4409" ], @@ -523,59 +793,83 @@ [ "PCHZNSR #585" ], - "PCHPLUSSR #198": + "PCHPLUSSR #198": [ "PCHPLUSSR#198" ], - "Robin": + "Robin": [ - "Robin" + "Robin", + "Robin " ], - "Senate": + "Senate": [ "Sanate", - "Senate" + "Senate", + "Sanate ", + "Senata " + ], + "Shaki": + [ + "Shaki", + "shaki" ], - "Shorima": + "Shorima": [ "SHORIMA", "Shorima", + "Shorima ", "Shorimo", - "Shoroma" + "Shoroma", + "Shorina" ], - "Simba": + "Simba": [ "Simba", "Sinba" ], - "SR DIFFERENTIAL #27": + "Sofumer": + [ + "Sofumer" + ], + "SR DIFFERENTIAL #27": [ "SR DIFFERENTIAL # 27", "Sr differentials #27" ], - "SR DIFFERENTIAL #51": + "SR DIFFERENTIAL #51": [ "SR DIFFERENTIAL # 51", "SR Differential#51" ], - "SR DIFFERENTIAL #33": + "SR DIFFERENTIAL #33": [ "Sr differential #33" ], - "SR DIFFERENTIAL #20": + "SR DIFFERENTIAL #20": [ "SR Differentials#20" ], - "Sydney Australia #83": + "Sydney Australia #83": [ "Sydney Australia #83" ], - "Tsehay": + "Tate": + [ + "Tate" + ], + "Triticale": + [ + "Triticale", + "Triticale ", + "Tritical" + ], + "Tsehay": [ "Tsehay" ], - "Unknown": + "Unknown": [ "Unknown", "Uknown", @@ -586,102 +880,146 @@ "Unkown", "unkown", "Unkwon", - "Unkwown" - ], - "USDA #105": + "Unkwown", + "Unkwown ", + "Unknown (observation nursery)", + "unknow", + "Kenya Hawk?", + "I known", + "UnKnown", + "unknown ", + "Unkwon ", + "Inknown", + "Known", + "Ubknown", + "Ujknown", + "Ukown", + "UNKNOWN", + "Unknown (Duma?)", + "Unkowb", + "Unlnown", + "Uninown", + "Unko", + "Variety", + "Uknown old Kenyan variety", + "Uknown variety", + "Uknown awnless variety", + "Uknown variety", + "Unknown variety" + ], + "USDA #105": [ "USDA#105" ], - "USDA #112": + "USDA #112": [ "USDA#112" ], - "USDA #547": + "USDA #547": [ "USDA#547" ], - "USDA #747": + "USDA #747": [ "USDA#747" ], - "USDA #823": + "USDA #823": [ "USDA#823" ], - "USDA #994": + "USDA #994": [ "USDA#994", "USDA #994" ], - "USDA #1061": + "USDA #1061": [ "USDA#1061", "USDA #1061" ], - "USDA #1135": + "USDA #1135": [ "USDA#1135", "USDA #1135" ], - "USDA #1458": + "USDA #1458": [ "USDA#1458", "USDA #1458" ], - "USDA #1588": + "USDA #1588": [ "USDA#1588", "USDA #1588" ], - "USDA #1612": + "USDA #1612": [ "USDA #1612" ], - "USDA #1762": + "USDA #1762": [ "USDA#1762" ], - "Wane": + "Wane": [ "Wane", - "Wanie" + "Wanie", + "wane" ], - "YR DIFFERENTIAL #1": + "YR DIFFERENTIAL #1": [ "YR DIFFERENTIAL#1", "YR DIFFERENTIAL #1" ], - "YR DIFFERENTIAL #8": + "YR DIFFERENTIAL #4": + [ + "YR DIFFERENTIAL#4", + "YR DIFFERENTIAL #4", + "Yr differential #4" + ], + "YR DIFFERENTIAL #8": [ "YR DIFFERENTIAL#8", "YR DIFFERENTIAL #8" ], - "YR DIFFERENTIAL #10": + "YR DIFFERENTIAL #10": [ "YR DIFFERENTIAL#10", "YR DIFFERENTIAL #10" ], - "YR DIFFERENTIAL #15": + "YR DIFFERENTIAL #15": [ "YR DIFFERENTIAL#15", "YR DIFFERENTIAL #15" ], - "YR DIFFERENTIAL #24": + "YR DIFFERENTIAL #24": [ "YR DIFFERENTIAL#24", "YR DIFFERENTIAL #24" ], - "YR DIFFERENTIAL #27": + "YR DIFFERENTIAL #27": [ "YR DIFFERENTIAL#27", "YR DIFFERENTIAL #27" ], - "YR27/6*AOC": + "YR DIFFERENTIAL #38": + [ + "YR DIFFERENTIAL#38", + "YR DIFFERENTIAL #38", + "Yr Differential 38" + ], + "YR DIFFERENTIAL #40": + [ + "YR DIFFERENTIAL#40", + "YR DIFFERENTIAL #40", + "Yr DIFF 40" + ], + "YR27/6*AOC": [ "YR27/6*AOC" ], - "YR8/6*AOC": + "YR8/6*AOC": [ "YR8/6*AOC" ] -} \ No newline at end of file +} diff --git a/pipeline_resources/EastAfrica/configs/coordinator/an/env_suit_config_EastAfrica_an_live.json b/pipeline_resources/EastAfrica/configs/coordinator/an/env_suit_config_EastAfrica_an_live.json index 3dd1a159b30ebf902220875f2a09aec2eab8e546..a1991b53a23b407b8d6dc7db78b7f2ad97ccf63e 100644 --- a/pipeline_resources/EastAfrica/configs/coordinator/an/env_suit_config_EastAfrica_an_live.json +++ b/pipeline_resources/EastAfrica/configs/coordinator/an/env_suit_config_EastAfrica_an_live.json @@ -19,7 +19,7 @@ "LeafRust": { "suitability_modules": ["semibool_dewperiod"], "past_steps": 0, - "future_steps": 7, + "future_steps": 2, "thresholds": { "temperature": [2,15,20,30], "precipitation": 0, @@ -29,7 +29,7 @@ "StemRust": { "suitability_modules": ["semibool_dewperiod"], "past_steps": 0, - "future_steps": 7, + "future_steps": 2, "thresholds": { "temperature": [2,15,24,30], "precipitation": 0, @@ -49,7 +49,7 @@ "LeafRust_TempOnly": { "suitability_modules": ["semibool_dewperiod"], "past_steps": 0, - "future_steps": 7, + "future_steps": 2, "thresholds": { "temperature": [2,15,20,30], "precipitation": -1, @@ -59,7 +59,7 @@ "StemRust_TempOnly": { "suitability_modules": ["semibool_dewperiod"], "past_steps": 0, - "future_steps": 7, + "future_steps": 2, "thresholds": { "temperature": [2,15,24,30], "precipitation": -1, diff --git a/pipeline_resources/EastAfrica/configs/coordinator/fc/advisory_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/fc/advisory_config_EastAfrica_fc_live.json index ae89125c60a3f8e3b348a7619f0dd4140b0a4fba..1b42456e8e27a38712a8c7388a4b6f815c0fc85e 100644 --- a/pipeline_resources/EastAfrica/configs/coordinator/fc/advisory_config_EastAfrica_fc_live.json +++ b/pipeline_resources/EastAfrica/configs/coordinator/fc/advisory_config_EastAfrica_fc_live.json @@ -2,12 +2,11 @@ "ProcessPreJob" : "query_past_successes", "ProcessInJob" : "process_in_job_advisory", "ProcessEWSPlotting" : "do_nothing", - "seasonStartString" : "20230801", + "seasonStartString" : "20240131", "SurveyPathTemplate" : "${WorkspacePath}/SURVEYDATA_${dateString}/Groups/surveys_PROD.csv", "DependentComponents" : [ "Deposition", - "Environment", - "Epidemiology" + "Environment" ], "Environment" : { "SuccessFileTemplate" : "${WorkspacePath}/ENVIRONMENT_2.0_${StartString}/STATUS_SUCCESS", diff --git a/pipeline_resources/EastAfrica/configs/coordinator/fc/env_suit_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/fc/env_suit_config_EastAfrica_fc_live.json index 86f080ca898154ada68965b9b996e0ec7783f032..2901e12bdf822e94b25692f6adb43fdb73fd2294 100644 --- a/pipeline_resources/EastAfrica/configs/coordinator/fc/env_suit_config_EastAfrica_fc_live.json +++ b/pipeline_resources/EastAfrica/configs/coordinator/fc/env_suit_config_EastAfrica_fc_live.json @@ -95,6 +95,10 @@ "Zambia" : { "ChartConfig" : "${ConfigsPath}/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json", "FilterForCountry" : "True" + }, + "Tanzania" : { + "ChartConfig" : "${ConfigsPath}/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json", + "FilterForCountry" : "True" } } } diff --git a/pipeline_resources/EastAfrica/configs/coordinator/fc/epi_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/fc/epi_config_EastAfrica_fc_live.json index 9fc3b756c6d47d27b97ee8d9d73194d430d2215f..537285090320d9d626b880a0de5a4a2dff1087fa 100644 --- a/pipeline_resources/EastAfrica/configs/coordinator/fc/epi_config_EastAfrica_fc_live.json +++ b/pipeline_resources/EastAfrica/configs/coordinator/fc/epi_config_EastAfrica_fc_live.json @@ -1,7 +1,7 @@ { "DiseaseNames" : ["StemRust"], - "CalculationSpanDays" : ["20231130",5], - "continue" : false, + "CalculationSpanDays" : ["20230715",5], + "continue" : true, "TimeStep_hours": "3", "ProcessPreJob" : "process_pre_job_epi", "ProcessInJob" : "process_in_job_epi", diff --git a/pipeline_resources/EastAfrica/configs/coordinator/fc/survey_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/fc/survey_config_EastAfrica_fc_live.json index 82070885d709ad3b79d942db11477e21441bb327..aad5a586dee9a7b7dce21729dc2eae9795bb0530 100644 --- a/pipeline_resources/EastAfrica/configs/coordinator/fc/survey_config_EastAfrica_fc_live.json +++ b/pipeline_resources/EastAfrica/configs/coordinator/fc/survey_config_EastAfrica_fc_live.json @@ -3,7 +3,7 @@ "ProcessInJob": "process_in_job_survey", "ProcessEWSPlotting": "process_EWS_plotting_survey", "AcceptableDowntimeDays": 70, - "SeasonStartString": "20220815", + "SeasonStartString": "20230815", "ServerCredentialsFile": "${ConfigsPath}/coordinator/Cred-WRT.json", "Groups": { "PROD": { diff --git a/pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv b/pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv index b956e9ea5bea945fc1cd23418bc942a3a7d73c49..27982bad32ac58c84c50d2fc286f8c96b5ef5e2d 100644 --- a/pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv +++ b/pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv @@ -16,9 +16,3 @@ NAME,TOPOGRAPHY,_TOPOGRAPHY,TOPOGRAPHY NAME,RELATIVE_HUMIDITY,_RELATIVE_HUMIDITY_(%),RELATIVE_HUMIDITY NAME,TEMP,_TEMPERATURE_(C),TEMP NAME,SURFACE_AIR_PRESSURE,_PRESSURE_(PA),PRESSURE_PA -NAME,SPECIFIC_HUMIDITY,SPECIFIC_HUMIDITY,SPECIFIC_HUMIDITY -NAME_NEW,PRECIPITATION_RATE,PRECIPITATION_RATE,PRECIPITATION_RATE -NAME_NEW,SOIL_MOISTURE,SOIL_MOISTURE,SOIL_MOISTURE -NAME_NEW,TOPOGRAPHY,TOPOGRAPHY,TOPOGRAPHY -NAME_NEW,RELATIVE_HUMIDITY,RELATIVE_HUMIDITY,RELATIVE_HUMIDITY -NAME_NEW,TEMP,TEMPERATURE,TEMP diff --git a/pipeline_resources/EastAfrica/configs/met_extractor/template_new_extract_config.json b/pipeline_resources/EastAfrica/configs/met_extractor/template_new_extract_config.json deleted file mode 100644 index d5aa01c6630a5ea5203d8f13f57c11e52f21acb2..0000000000000000000000000000000000000000 --- a/pipeline_resources/EastAfrica/configs/met_extractor/template_new_extract_config.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "MET_DATA_TYPE": "NAME", - "DATA_TYPES": [ - "TEMP", - "PRECIPITATION_RATE", - "RELATIVE_HUMIDITY" - ], - "METO_PARAMS": { - "METO_PARTS": [ - "no_part" - ] - }, - "POST_PROCESSING": { - "PROCESSORS": [ - { - "PROCESSOR_NAME": "RIE", - "OUT_FILE_NAME": "RIE", - "PYTHONPATH": "/home/lb584/git/ews_environmental_suitability_v2/", - "CLASSPATH": "ewses_vectorised_timepoint_processor", - "CLASSNAME": "EnvSuitColTimePointProcessor", - "DEPENDS": [], - "TIMEPOINTS_FILE_PATH": "#", - "FUTURE_FIELDS": [ - { - "PROCESSOR_NAME": "TEMP", - "DURATION": 7, - "ENABLED": "TRUE" - }, - { - "PROCESSOR_NAME": "PRECIPITATION_RATE", - "DURATION": 7, - "ENABLED": "TRUE" - }, - { - "PROCESSOR_NAME": "RELATIVE_HUMIDITY", - "DURATION": 7, - "ENABLED": "TRUE" - } - ], - "PARAMS": { - "suitability_modules": ["#"], - "thresholds": { - "temperature": [2,30], - "precipitation": 0, - "relative_humidity": 90 - } - } - } - ] - }, - "TIMEPOINTS_FILE_PATH": "#", - "TIME_INCREMENT": 4, - "MERGE_CHUNK_SIZE": 400, - "OUTPUT_DIR": "#", - "SPATIAL_POINTS_FILE_PATH": "#", - "SLURM": "TRUE", - "FIELD_NAME_CONSTANTS_PATH": "#", - "NCDF_DIR_PATH": "#", - "RECURSIVE_SEARCH": "FALSE" -} diff --git a/pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json b/pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json index ecc2a4886d63d0a328cba9a527d9ad6917641278..e6f6e049f6fe9ac9a74b914f5cd0091681a7741b 100644 --- a/pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json +++ b/pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json @@ -5,11 +5,6 @@ "PRECIPITATION_RATE", "RELATIVE_HUMIDITY" ], - "METO_PARAMS": { - "METO_PARTS": [ - "no_part" - ] - }, "POST_PROCESSING": { "PROCESSORS": [ { diff --git a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json index b23f4bafe986c44ca9bdc71493b559ede357617c..529b72b9086978566785adfd65777d07da2bfa0f 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json +++ b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json @@ -11,7 +11,7 @@ "LEGEND_ALPHA": 0, "TITLE_FONT_SIZE": 30, "COUNTRY_LANDPOINTS_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/gis_data/ethiopia/ethiopia_points_epi.csv", - "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_Ethiopia_plotting.png", + "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_EastAfrica_plotting.png", "COUNTRY_STRING": "ethiopia", "PLACES_TO_PLOT": ["CAPITAL","LARGE","MEDIUM"], "PLACES_TO_EXCLUDE": ["Bandarbeyla","Al Hudaydah"], diff --git a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json index 1aae202e59908f04679f952eb202eed34f175080..63991dd88a0179cc24e360b6201a9405b8ff685e 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json +++ b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json @@ -11,7 +11,7 @@ "LEGEND_ALPHA": 0, "TITLE_FONT_SIZE": 30, "COUNTRY_LANDPOINTS_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/gis_data/ethiopia/ethiopia_points.csv", - "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_Ethiopia_plotting.png", + "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_EastAfrica_plotting.png", "COUNTRY_STRING": "ethiopia", "PLACES_TO_PLOT": ["CAPITAL","LARGE","MEDIUM"], "PLACES_TO_EXCLUDE": ["Bandarbeyla","Al Hudaydah"], diff --git a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json index d4e368abc94e6d92b1199be249c72dfc7c8839ce..1dbbf46d2cd76f1fae40084d367a5c36420f8ee3 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json +++ b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json @@ -12,7 +12,7 @@ "LEGEND_ALPHA": 0.4, "TITLE_FONT_SIZE": 30, "COUNTRY_LANDPOINTS_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/gis_data/kenya/kenya_points.csv", - "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_Kenya_plotting.png", + "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_EastAfrica_plotting.png", "COUNTRY_STRING": "kenya", "PLACES_TO_PLOT": ["CAPITAL","LARGE", "MEDIUM"], "PLACES_X_LIMIT": 0.99 diff --git a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json index 67eea920ca25d07045cfe3d61d0385acd11e2a7e..9633a9291fc72a53b9f4b0664712eef1ff7fe150 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json +++ b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json @@ -11,7 +11,7 @@ "LEGEND_ALPHA": 0, "TITLE_FONT_SIZE": 30, "COUNTRY_LANDPOINTS_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/gis_data/tanzania/tanzania_points.csv", - "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_Ethiopia_plotting.png", + "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/images/logos_EastAfrica_plotting.png", "COUNTRY_STRING": "tanzania", "PLACES_TO_PLOT": ["CAPITAL","LARGE","MEDIUM"], "PLACES_TO_EXCLUDE": [], diff --git a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json index f44c22ab866a69f67e61b50971715df5562f79fe..1f9d72737b8f86599013a1c145a620f6deec3053 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json +++ b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json @@ -11,8 +11,8 @@ "LEGEND_ALPHA": 0, "TITLE_FONT_SIZE": 30, "COUNTRY_LANDPOINTS_FILE": "${ProjectRoot}/regions/EastAfrica/resources/assets/plotting/gis_data/zambia/zambia_points.csv", + "COUNTRY_LOGO_FILE": "${ProjectRoot}/regions/EastAfrica/resources/plotting/assets/images/logos_EastAfrica_plotting.png", "COUNTRY_STRING": "zambia", "PLACES_TO_PLOT": ["CAPITAL","LARGE","MEDIUM"], - "PLACES_TO_EXCLUDE": ["Bandarbeyla","Al Hudaydah"], "PLACES_X_LIMIT": 1 } diff --git a/pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json b/pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json index ab5e800db2f12f69b2d6634af8d0b3baf26ffe8a..e3b72b4e1d2e7520af1e478fff6d3dff9618d255 100644 --- a/pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json +++ b/pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json @@ -8,8 +8,8 @@ "MAP_TITLE": "OVERRIDDEN", "RUN_PREFIX": "OVERRIDDEN", "LEGEND_TITLE": "relative infection\nefficiency %", - "PLOT_TIFS": "true", "PLOT_SHAPES": "false", + "PLOT_TIFS": "true", "PLOT_IMAGES": "true", "PLOT_DAILY_IMAGES": "false", "PLOT_HOURLY_IMAGES": "false", diff --git a/pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json b/pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json index 0a5f7eeb33b1b703c8325437aa450370e8a98050..1b9643d101c156df4604aa2b69e110fbeca73f71 100644 --- a/pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json +++ b/pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json @@ -5,9 +5,9 @@ "wheat_rasters_bydate" : { "20170101" : "${AssetsPath}/source_gen/spam2017V1r1_SSA_gr_H_WHEA_A_clipEastAfrica.tif" }, - "cluster_poly_file" : "${AssetsPath}/source_gen/boundaries/EastAfrica_clusters.shp", - "id_col" : "id", - "region_file" : "${AssetsPath}/source_gen/boundaries/EastAfrica_9regions.shp", + "cluster_poly_file" : "${AssetsPath}/source_gen/UMG_Mk11_grid_EastAfrica_withregions.shp", + "id_col" : "cluster_id", + "region_file" : "${AssetsPath}/source_gen/UMG_Mk11_grid_EastAfrica_withregions.shp", "region_id_col" : "REGION_ID", "wheat_stages_file" : "${AssetsPath}/source_gen/approx_growth_timing_cleaned.csv" } diff --git a/pipeline_resources/SouthAsia/configs/advisory_builder/config_SouthAsia_variety_names_tidy.json b/pipeline_resources/SouthAsia/configs/advisory_builder/config_SouthAsia_variety_names_tidy.json index 9fd6f03aeaaf0135bd1bb7c0edec1e6044b6b0a0..a612922c41660ff73382e8405aaf5a2ce7701803 100755 --- a/pipeline_resources/SouthAsia/configs/advisory_builder/config_SouthAsia_variety_names_tidy.json +++ b/pipeline_resources/SouthAsia/configs/advisory_builder/config_SouthAsia_variety_names_tidy.json @@ -1,9 +1,20 @@ { + "Abdul Sattar": + [ + "Abdul Sattar" + ], + "Abdul Sattar 02": + [ + "Abdul Sattar 02", + "Abdul Sattar _02", + "Abdul Sattar_02", + "Abdul sattar_02" + ], "Achyut" : [ "Achyut" ], - "Aditya" : + "Aditya" : [ "Aditya", "Aaditya" @@ -18,13 +29,19 @@ "AKBAR 19 ", "AKBAR 19", "Akber", - "Akber 19" + "Akber 19", + "Akbar 19,", + "Akbar.19", + "Akber19", + "Akber_19" ], "Anaj-17": [ "Anaj", "Anaj 17", - "Anaj-17" + "Anaj-17", + "Anaj17" + ], "Annapurna-1": [ @@ -33,22 +50,32 @@ "Annapurna 1", "Annapurna-1" ], - "Banganga" : + "Bajosokha": + [ + "Bajo Sokha (check)", + "Bajo Sokha kaa", + "Bajoka 1" + ], + "Banganga" : [ "Banganga", "Bandganga", - "Banaganga" + "Banaganga", + "Badganga" ], "BARI Gom 17" : [ "BARI Gom 17", - "Bari gom 17" + "Bari gom 17", + "Barigom 17", + "Barigom17", + "Bari gom17" ], "BARI Gom 20" : [ "BARI Gom 20" ], - "BARI Gom 21 (Shatabdi)" : + "BARI Gom 21 (Shatabdi)" : [ "Satapdi", "Shatabdi", @@ -56,7 +83,7 @@ "Sotabthe", "Sotabthi" ], - "BARI Gom 24" : + "BARI Gom 24" : [ "BARI Gom 24", "Prodip", @@ -65,7 +92,7 @@ "Bari gom24", "BARI gom 24" ], - "BARI Gom 25" : + "BARI Gom 25" : [ "BARI Gom 25", "Bari gom 25", @@ -73,7 +100,7 @@ "BARI Gom25", "BARI Gom25" ], - "BARI Gom 26" : + "BARI Gom 26" : [ "26", "Bari 26", @@ -94,9 +121,13 @@ "BARI Gpm26", "BAR Gon26", "BARI Gom. 26", - "BARI 26" + "BARI 26", + "Bari Gam 26", + "Bari gom26", + "Bhari Gam 26", + "বারি ২৬" ], - "BARI Gom 27" : + "BARI Gom 27" : [ "BARI GOM 27", "BARI Gom 27", @@ -108,7 +139,7 @@ "BARI GOM27", "BARIGOM27" ], - "BARI Gom 28" : + "BARI Gom 28" : [ "Bari Gam 28", "Bari gam 28", @@ -137,9 +168,11 @@ "BARi Gom 28", "BARI Gom 28.", "BARI GOM28", - "BARI gom28" + "BARI gom28", + "BARIGom 28", + "Barigom28" ], - "BARI Gom 29" : + "BARI Gom 29" : [ "BARI Gom 29", "Bari Gom 29", @@ -149,7 +182,7 @@ "BARI gom 29", "RARI Gom 29" ], - "BARI Gom 30" : + "BARI Gom 30" : [ "30", "BAR Gom 30", @@ -193,14 +226,25 @@ "BARRI Gom 30", "Brri gom 30", "BARIGom30", - "VARI Gom 30" - ], - "BARI Gom 31" : + "VARI Gom 30", + "Bari Gam 30", + "Bari GOM 30", + "BARIG 30", + "BARIGOM 30", + "BARRI Gum30", + "Bari Gom30", + "Bhari Gam 30", + "BAARIGom 30", + "BARRI Ggom 30", + "BRRI Gom 30" + ], + "BARI Gom 31" : [ "BARI Gom31", - "Barigom,31" + "Barigom,31", + "Barigom31" ], - "BARI Gom 32" : + "BARI Gom 32" : [ "32", "Baarigom 32", @@ -223,9 +267,22 @@ "BARI gom32", "BARIG Gom 32", "BARIGom 32", - "BARRI Gom 32" - ], - "BARI Gom 33" : + "BARRI Gom 32", + "BARI Gom -32", + "BARI Gam 32", + "BARI Gom -32", + "BARI Gom- 32", + "Bari Gom32", + "BARRI Gum 32", + "BARRI Gum32", + "BARIGom32", + "বারি গম ৩২", + "৩২", + "BRRI Gom 32", + "BRRRI gom 32", + "BRRRI Gom32" + ], + "BARI Gom 33" : [ "33", "ba 33", @@ -291,14 +348,39 @@ "BARRI Gum 33", "BARRI gum 33", "BRRI GOM 33", - "Brri Gom 33" + "Brri Gom 33", + "BARRI Gum33", + "BARU Gom 33", + "BATIGom 33", + "BARI Gam 33", + "BARIGOM 33", + "Bari Gom-33", + "BARI GOm33", + "BARI33", + "BRRI Gom 33", + "BRRI Gon 33", + "Bsri gom 33", + "বারি গম ৩৩", + "BARl Gom 33", + "BSRIGom 33" + ], + "BARI Gom 34": + [ + "BARI Gom 34", + "BARI GOM 34" ], - "BARI GOM Sonali" : + "BARI GOM Sonali" : [ "BARI GOM Sonali", "BARI Gom sonali", "BARI Gom Sonali" ], + "Bhakhar star": + [ + "Bhakhar star", + "Bhakkar star", + "Bhkar Star" + ], "Bhaskar (Indian)": [ "Bhaskar (Indian)" @@ -307,27 +389,221 @@ [ "Bheriganga" ], - "Bhirkuti" : + "Bhirkuti" : [ "Bhirkuti", "Bhrikuti" ], - "BL 4341" : + "BL 4341" : [ "BL 4341", "BL4341!", "BL4341" ], - "BL 4669" : + "BL 4669" : [ "BL 4669", "BL 4669(pipeline variety)" ], - "BL 4682" : + "BL 4682" : [ "BL 4682" ], + "Bumthang Ka Drukchu": + [ + "Bumthang ka Drukchu", + "Bumthang ka drukchu", + "Bumthangka drukchu", + "Bumthang Ka Drukchu" + ], + "BWMRI Gom 1" : + [ + "BWMRI 1", + "BWMRI Gom 1", + "WMRI Gom 1", + "WMRI Gom -1", + "WMRI 1", + "WMRI,Gom 1", + "BWMRI GOM 1", + "BWMRI Gom1", + "BWMRI-1", + "wmri 1", + "WMRI Gom 1", + "WMRIGom 1" + ], + "BWMRI Gom 2" : + [ + "WMRI Gom 2", + "BWMRI Gom 2", + "BWMRI Gom2", + "BWMRI Gom-2", + "BWMRI 2", + "WMRI Gom 2", + "BWMRI GOM 2", + "WMRIGom 2" + ], + "BWMRI Gom 3" : + [ + "BWMRI Gom 3", + "BARI BWMRI 3", + "BMRI 3", + "BWMRI3", + "WMRI Gom 3", + "WMRI-3", + "BWMRI 3", + "WMRI 3" + ], + "CIMMYT line 1": + [ + "CIMMYT line 1", + "CIMMYT Line 1", + "CIMMYT LINE 1" + ], + "CIMMYT line 2": + [ + "CIMMYT line 2", + "CIMMYT Line 2", + "CIMMYT LINE 2" + ], + "CIMMYT line 3": + [ + "CIMMYT line 3", + "CIMMYT Line 3", + "CIMMYT LINE 3" + ], + "CIMMYT line 4": + [ + "CIMMYT line 4", + "CIMMYT Line 4", + "CIMMYT LINE 4" + ], + "CIMMYT line 5": + [ + "CIMMYT line 5", + "CIMMYT Line 5", + "CIMMYT LINE 5" + ], + "CIMMYT line 6": + [ + "CIMMYT line 6", + "CIMMYT Line 6", + "CIMMYT LINE 6" + ], + "CIMMYT line 7": + [ + "CIMMYT line 7", + "CIMMYT Line 7", + "CIMMYT LINE 7" + ], + "CIMMYT line 8": + [ + "CIMMYT line 8", + "CIMMYT Line 8", + "CIMMYT LINE 8" + ], + "CIMMYT line 9": + [ + "CIMMYT line 9", + "CIMMYT Line 9", + "CIMMYT LINE 9" + ], + "CIMMYT line 10": + [ + "CIMMYT line 10", + "CIMMYT Line 10", + "CIMMYT LINE 10" + ], + "CIMMYT line 11": + [ + "CIMMYT line 11", + "CIMMYT Line 11", + "CIMMYT LINE 11" + ], + "CIMMYT line 12": + [ + "CIMMYT line 12", + "CIMMYT Line 12", + "CIMMYT LINE 12" + ], + "CIMMYT line 13": + [ + "CIMMYT line 13", + "CIMMYT Line 13", + "CIMMYT LINE 13" + ], + "CIMMYT line 14": + [ + "CIMMYT line 14", + "CIMMYT Line 14", + "CIMMYT LINE 14" + ], + "CIMMYT line 15": + [ + "CIMMYT line 15", + "CIMMYT Line 15", + "CIMMYT LINE 15" + ], + "CIMMYT line 16": + [ + "CIMMYT line 16", + "CIMMYT Line 16", + "CIMMYT LINE 16" + ], + "CIMMYT line 17": + [ + "CIMMYT line 17", + "CIMMYT Line 17", + "CIMMYT LINE 17" + ], + "CIMMYT line 18": + [ + "CIMMYT line 18", + "CIMMYT Line 18", + "CIMMYT LINE 18" + ], + "CIMMYT line 19": + [ + "CIMMYT line 19", + "CIMMYT Line 19", + "CIMMYT LINE 19" + ], + "CIMMYT line 20": + [ + "CIMMYT line 20", + "CIMMYT Line 20", + "CIMMYT LINE 20" + ], + "CIMMYT line 21": + [ + "CIMMYT line 21", + "CIMMYT Line 21", + "CIMMYT LINE 21" + ], + "CIMMYT line 22": + [ + "CIMMYT line 22", + "CIMMYT Line 22", + "CIMMYT LINE 22" + ], + "CIMMYT line 23": + [ + "CIMMYT line 23", + "CIMMYT Line 23", + "CIMMYT LINE 23" + ], + "CIMMYT line 24": + [ + "CIMMYT line 24", + "CIMMYT Line 24", + "CIMMYT LINE 24" + ], + "CIMMYT line 25": + [ + "CIMMYT line 25", + "CIMMYT Line 25", + "CIMMYT LINE 25" + ], "Danphe" : [ "Danphe" @@ -344,12 +620,23 @@ "Dilkash-20", "Dilkash 20", "DILKASH-20", - "SILKASH 20" + "SILKASH 20", + "Dilkash20", + "Dilkkash 20" ], "Dilkash-21": [ "Dilkash-21", - "DILKASH-21" + "DILKASH-21", + "DILKASH 21", + "Dilkash 21" + ], + "Durum wheat": + [ + "Dura. Wheat", + "Duram", + "Durum", + "Durum wheat line imported from Indian market" ], "Faisalabad-08" : [ @@ -361,7 +648,18 @@ "Fsd08", "Fsd_08", "Fsd-08", - "Faisalabad 08" + "Faisalabad 08", + "Faisalabad _08", + "Faisalabad_08" + ], + "Fakhar e Bhakar": + [ + "Fakhar e Bhakar", + "Fakhar e Bhakkar", + "Fakhra bkhar", + "Fakhrabkhar", + "Falhrabhakhar", + "Fakhar Bakhar" ], "Gaffar": [ @@ -374,21 +672,42 @@ "Galaxy-13", "Galaxy-13 ", "GALAXY-13", - "GALAXY-13 " + "GALAXY-13 ", + "Galaxy", + "Galaxy_13" ], - "Gautam" : + "Gautam" : [ "GAUTAM", "Gautam", "Gautum", - "Gautan" + "Gautan", + "Guatam" + ], + "Gulzar": + [ + "Gulzar" ], - "HD 2967" : + "Guma Sokha": + [ + "Guma Sokha", + "Guma sokha (check)", + "Guma sokha ka", + "Guma sokha- kaap", + "Guma sokha-kaa", + "Gumasokha", + "Gumasokha kaa" + ], + "HD 2204": + [ + "HD 2204" + ], + "HD 2967" : [ "HD 2967", "HD2967" ], - "HD 3086" : + "HD 3086" : [ "HD 3086" ], @@ -396,16 +715,21 @@ [ "HIMGANGA" ], - "Indian (China 3)" : + "Imdad-05": + [ + "Imdad_05" + ], + "Indian (China 3)" : [ "Indian ( china 3)", "IIndian(china 3)", "Indian( china 3)", "Indian(china 3)", + "Indian (china 3)", "China 3", "Indian China 3" ], - "Indian (China 4)" : + "Indian (China 4)" : [ "Indian ( china 4)", "Indian(china 4)", @@ -413,18 +737,27 @@ "IIndian (china 4)", "Indian( china 4)", "Indian (china4)", - "indian(china 4)" + "indian(china 4)", + "Chaina 4", + "Indian ( china 4)" ], - "Kanchan" : + "Jaga kaa": + [ + "Jaga kaa" + ], + "Kanchan" : [ "Kanchan", - "Kanchon" + "Kanchon", + "KANCHAN", + "KANCHON", + "kanchon" ], "Kanti" : [ "Kanti" ], - "Khumal Shakti" : + "Khumal Shakti" : [ "Khumal Shakti" ], @@ -432,15 +765,15 @@ [ "Kundan" ], - "Lok-1" : + "Lok-1" : [ "Lok-1" ], - "Munal" : + "Munal" : [ "Munal" ], - "Mudule" : + "Mudule" : [ "Mudule", "Mudule-1" @@ -448,34 +781,85 @@ "NAL-52": [ "NAL -52", - "NAL-52" + "NAL-52", + "NAL52" + ], + "Nawab-21": + [ + "Nawab 21", + "Nawab8_21" ], "NL 1179": [ "NL 1179", "NL 1179, pipeline variety for mid hill, yellow rust resistant, disseminated by NWRP, Bhairahawa from last season in Pyuthan" ], + "NL 1446" : + [ + "NL1446", + "NL 1446" + ], + "NL 1488": + [ + "NL 1488" + ], + "NL 1612" : + [ + "NL1612" + ], "NL 1616" : [ "NL 1616" ], - "NL 971" : + "NL 1716": [ - "NL 971", - "NL-971" + "NL 1716", + "NL1716" ], - "NL1446" : + "NL 1835": [ - "NL1446" + "NL 1835", + "NL1835" ], - "NL1612" : + "NL 971" : [ - "NL1612" + "NL 971", + "NL-971", + "NL971" ], "Nepal 297" : [ "Nepal 297", - "NL297" + "NL297", + "NL 297" + ], + "NWDSN 03": + [ + "NWDSN 03" + ], + "NWDSN 148": + [ + "NWDSN 148" + ], + "NWDSN 21": + [ + "NWDSN 21" + ], + "NWDSN 79": + [ + "NWDSN 79" + ], + "NWDSN 806": + [ + "NWDSN 806" + ], + "NWDSN 172": + [ + "NWDSN172" + ], + "NWDSN 588": + [ + "NWDSN588" ], "Pasang lhamu" : [ @@ -495,28 +879,32 @@ "RR 21" : [ "RR 21", - "RR-21" + "RR-21", + "RR21" + ], + "Sadiq-21": + [ + "Sadiq 21", + "Sadiq21" + ], + "Saher-06": + [ + "Saher", + "Seher 06" ], - "Saher": + "Sehet-06": [ - "Saher" + "Sehet06" ], "Siddhartha": [ "Siddhartha" ], - "Sonalika" : + "Sonalika" : [ "Sonalika" ], - "Sworgadwari" : - [ - "Sorgadwari", - "Sworgadwari", - "Sworgdwari", - "swogadwari" - ], - "Subhani 21": + "Subhani-21": [ "Subhani 21", "Subhani 21 ", @@ -533,15 +921,30 @@ "Surma", "Suruma" ], + "Sworgadwari" : + [ + "Sorgadwari", + "Sworgadwari", + "Sworgdwari", + "swogadwari", + "Sorghadwari", + "Swargadwari" + ], "SW-2" : [ "SW-2" ], + "Ujalla-16": + [ + "Ujala", + "Ujalla 16", + "Ujjala 16" + ], "Vaskar" : [ "Vaskar" ], - "Vijay" : + "Vijay" : [ "Vijay", "Vijaya", @@ -559,9 +962,10 @@ "Wattan (unapproved)", "Wattan (Unapproved)", "Wattan (unapproved)", - "Wattan," + "Wattan", + "Watan" ], - "WK 1204" : + "WK 1204" : [ "WK 1204", "WK1204", @@ -570,72 +974,54 @@ "Wk 1204", "we 1204" ], - "WK 1481" : + "WK 1481" : [ "WK1481" ], - "WK 2748 (Bheri-Ganga)" : + "WK 2748 (Bheri-Ganga)" : [ "Bheri-Ganga (WK 2748)" ], - "WK 3413" : - [ - "WK3413", - "WK 3413" - ], - "WK 3639" : - [ - "WK3639", - "WK 3639" - ], - "WK 2891" : + "WK 2891" : [ "WK2891", "WK 2891" ], - "WMRI Gom 1" : + "WK 3152": [ - "BWMRI 1", - "BWMRI Gom 1", - "WMRI Gom 1", - "WMRI Gom -1", - "WMRI 1", - "WMRI,Gom 1", - "BWMRI GOM 1", - "BWMRI Gom1", - "BWMRI-1", - "wmri 1", - "WMRI Gom 1" + "WK3152" ], - "WMRI Gom 2" : + "WK 3413" : [ - "WMRI Gom 2", - "BWMRI Gom 2", - "BWMRI Gom2", - "BWMRI Gom-2", - "BWMRI 2", - "WMRI Gom 2" + "WK3413", + "WK 3413" ], - "WMRI Gom 3" : + "WK 3639" : [ - "BWMRI Gom 3", - "BARI BWMRI 3", - "BMRI 3", - "BWMRI3", - "WMRI Gom 3", - "WMRI-3" + "WK3639", + "WK 3639" + ], + "WK 3927": + [ + "WK3927" ], - "ZINC Gahun 1" : + "ZINC Gahun 1" : [ "ZINC 1", "ZINC Gagun 1", - "Zinc Gahun 1" + "Zinc Gahun 1", + "Zinc gahu 1" ], - "ZINC Gahun 2" : + "ZINC Gahun 2" : [ "Zinc Gahun 2" ], - "Local" : + "Zincole-16": + [ + "Zincol 16", + "Zincole 16" + ], + "Local" : [ "local", "LOCAL", @@ -645,9 +1031,18 @@ "Local landraces", "Local landraces(awnless)", "Local mudule", - "Loc al" + "Loc al", + "Agra local", + "Annapurna (Local)", + "Local variety", + "local mulure", + "local murule", + "own less local", + "Loca", + "Local bread wheat", + "Local(janath)" ], - "Mixed" : + "Mixed" : [ "HD2967 and HD3086", "Mixed", @@ -687,9 +1082,76 @@ "Dilkash, Arooj, Akbar", "Dilkash, Arooj, Nishan", "Dilkash, Faisalabad-2008", - "Wl-711, Shafaq-06, Morocco" - ], - "Unknown" : + "Wl-711, Shafaq-06, Morocco", + "531, NRN 67", + "600, WVD16", + "Abdul Sat tar+ TD_1", + "Akbar 19, Bhakar star", + "Akbar 19, Dilkas20, Anaj 17", + "Akbar 19, Dilkash 20, Bhakar star", + "Akbar 19, Faisalabad 08", + "Akbar 19, Nawab 21", + "Akbar with", + "Akbar, Arooj", + "Akber-19, Fakhre Bhakker, Dilkash and Mixtureof dofferent varities", + "Akber_19+Abdul Sattar_02", + "Anaj17, Akbar 19", + "Arooj, Akbar, Dilkash", + "BARI Gom 33 and", + "Anaj' Akbar", + "As_02+Akbet_19", + "Bhakar e Bhakar, Bhakar star, Akbar 19", + "Bhakhar star + Abdul sattar", + "Borlauge 16+ Markez+ NARC Supet", + "Different advance and candidate lines", + "Different but samples were collected from MOROCCO", + "Different enteries under disease sceerning Nurseries (Akbar19)", + "Dilkas 20 Akbar 19", + "Dilkash 20, Akbar 19", + "Dilkash 20, Nawab 21, Bhakar star", + "Dilkash and Arooj", + "Dilkash and Fakhr e Bhajker", + "Dilkash, Arooj and Akber19", + "Dilksh21, Akbar 19, Faisalabad 08,", + "Faisalabad 08 and unknown variety", + "Fakhar e Bhakkar, Akbar, Unknown", + "Fakhr e Bhakkar' Akbar, Ujala", + "Galaxy 13, Akbar 19, Dilkash20", + "Galaxy 13,_Akbar 19", + "Galaxy' Faisalabad' Akbar", + "Nawab 21, Akbar 19, Dilkash 20,", + "Nawab 21, Akbar 19, Fakhar e Bhakar", + "Seher 06, Faisalabad 08", + "TF_1+Abdul Sattar_02", + "Trap nurseries and historical lines", + "Trial+ Susceptible check", + "Unknown, Mixture", + "Mixed", + "Mixture. Unknown", + "Mixtutr", + "Morrocco + others", + "Trap nirseries", + "Trap nurseries", + "Trials", + "Different genotypes", + "Ujala, Akbar", + "Akber-19, Arooj, Dilkash, Subhani, Nishan, Fakhr e Bhakkar, Ghazi 19. Wafaq22. and Shahenshah", + "Akber19 and Dilkash", + "Akber19, As-2002, Dilkash and Nawab-21", + "Akber19. Dilkash. Subhani. Arooj . Fakhr e Bhakkar and Nawab 21", + "Akber_19+ Imdad_05+benazir_13", + "Akber_19. Dikash . Bakhar star", + "Arooj-21 and advance line", + "Bhakker Star. Nawab. Dilkash", + "Bhakhar and mixture", + "Dilkash. Akber 19. Nawab and Arooj", + "Faisalabad 08 and mixtures of different varities", + "Faisalabad 2008, Fakhre Bhakkar and Dilkash", + "mixture", + "Mixturr", + "Shahenshah, Akber,19, and Nawab21" + ], + "Unknown" : [ "Unknown", "Unknown (Mix)", @@ -738,18 +1200,36 @@ "2430", "66", "35", + "40", + "50", "Advance material", - "Different genotypes", "Na", "NS", "??", "???? ??", "Annon", "Dilkash", - "local mulure", - "local murule", "na", - "own less local", - "WMRI Gom 29" + "WMRI Gom 29", + "Bari Gom", + "BARI GOM E", + "Bb", + "BWAVTH19", + "Dilash", + "Dilkas", + "Un known", + "Un non", + "un non", + "Unknown", + "Unkonwn", + "UNKWON", + "Unnon", + "Dilkush", + "Dilkusj", + "Dilquash", + "H", + "TD_1", + "???? ?? ??", + "Unknown (Local awnless)" ] } diff --git a/pipeline_resources/SouthAsia/configs/coordinator/fc/survey_config_SouthAsia_fc_live.json b/pipeline_resources/SouthAsia/configs/coordinator/fc/survey_config_SouthAsia_fc_live.json index c610037f40350889c5e2d3d04c5344d89573702c..8f79ce077e3730e7e5df7bfecd1eefabc933b416 100755 --- a/pipeline_resources/SouthAsia/configs/coordinator/fc/survey_config_SouthAsia_fc_live.json +++ b/pipeline_resources/SouthAsia/configs/coordinator/fc/survey_config_SouthAsia_fc_live.json @@ -7,11 +7,13 @@ "ServerCredentialsFile" : "${ConfigsPath}/coordinator/Cred-WRT.json", "Groups" : { "PROD" : { - "Origin" : ["CSV_01", "CSV_02", "ODK_01", "ODK_02", "CSV-CAM"] + "Origin" : ["CSV_01", "CSV_02", "ODK_01", "ODK_02", "CSV-CAM"], + "site_information-survey_site" : ["Farmer", "farmer_field", "Seed_production", "Weed", "Road", "VCU", "Sentinel", "Other"] }, "WRT-Publ" : { "Origin" : ["CSV_01", "CSV_02", "ODK_01", "ODK_02"], - "PublishedLevel" : ["Publ"] + "PublishedLevel" : ["Publ"], + "site_information-survey_site" : ["Farmer", "farmer_field", "Seed_production", "Weed", "Road", "VCU", "Sentinel", "Other"] }, "Trial-sites" : { "Origin" : ["CSV_01", "CSV_02", "ODK_01", "ODK_02", "CSV-CAM"],