diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 514e1909159345d356c816cc9bc08a00b9ab7ee3..4edb11a993e5f0cbbb6efe71d1356f50f0f705a1 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -119,15 +119,21 @@ full_fat_tests: image: lb584/ews_coordinator:latest tags: ["ewas-production"] script: -# - export PYTHONPATH="$CI_PYTHON_PATH" - - echo $FULL_FAT_RUN_DATE - - echo $CUSTOM_RUN_DATE + -> + # - export PYTHONPATH="$CI_PYTHON_PATH" + echo $FULL_FAT_RUN_DATE + + echo $CUSTOM_RUN_DATE # - echo $PYTHONPATH - - echo "this is a manual job" - - cd $CI_PROJECT_DIR/tests/integration/full/ - - ls + + echo "this is a manual job" + + cd $CI_PROJECT_DIR/tests/integration/full/ + + ls # - rm /storage/app/EWS_prod/regions/EastAfrica/workspace/DEPOSITION_20230126/STATUS_* - -> python3 full_test_deposition.py + + python3 full_test_deposition.py --config /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --outdir /storage/app/EWS_prod/regions/EastAfrica/workspace/ --email_cred /storage/app/EWS_prod/envs/credentials/Cred_gmail.json