From c07a6e9922c3b3152a91fb08a3de542a950de342 Mon Sep 17 00:00:00 2001
From: lb584 <lb584@cam.ac.uk>
Date: Thu, 9 Nov 2023 10:32:16 +0000
Subject: [PATCH] fixing full-fat epi test to work with new fast version
---
tests/integration/full/full_test_epi.py | 9 ++++++++-
1 file changed, 8 insertions(+), 1 deletion(-)
diff --git a/tests/integration/full/full_test_epi.py b/tests/integration/full/full_test_epi.py
index 53dd143..33fb8ed 100644
--- a/tests/integration/full/full_test_epi.py
+++ b/tests/integration/full/full_test_epi.py
@@ -48,7 +48,14 @@ class FullTestEpi(BaseEpiTestSuite.EpiTestSuite):
run_dict['Epidemiology']['CalculationSpanDays'] = [0, 1]
run_dict['Epidemiology']['Deposition']['FileListerFunction'] = "list_onefile_operational"
run_dict['Epidemiology']['Environment']['FileListerFunction'] = "list_onefile_operational"
- # run_dict['Epidemiology']['Epi']['rescale_output_by_host_raster'] = False
+
+ """
+ When set to true, continue mode speeds up computation time and reduces data volume by starting from the start of
+ model formulations. This requires each epidemiological model formulation described under 'Epi' to have an
+ inputs specified alongside Deposition and Environment. In this test version, we do not have prior runs to draw
+ from, so setting to false
+ """
+ run_dict['Epidemiology']['continue'] = False
previous_day_string: str = IntegrationTestUtils.get_day_before_as_string(IntegrationTestUtils.TEST_START_DATE)
run_dict['Survey']['SeasonStartString'] = previous_day_string
--
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