diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index ed93210fb931505a308f057358a92b014ac21675..6ff11b498b95fd039d44ad01c7a030287cde4430 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -147,20 +147,20 @@ epi_fit: export LOGGING_CONFIG_FILE_PATH mkdir $CI_PROJECT_DIR/fitting_outputs - - cp -rv $OUTPUT_DIR/*.csv $OUTPUT_DIR/*.json $OUTPUT_DIR/parameter_sweep_heatmaps $CI_PROJECT_DIR/fitting_outputs/ - + + python3 $PACKAGES_DIR/epimodel/ews/epi_model/fit_lb584.py + /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/sys_config_epi_remote.json + /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/run_config_epi_long_remote.json + $OUTPUT_DIR + 2016 + python3 $PACKAGES_DIR/epimodel/ews/epi_model/epi_fit/params_metrics_file_compare.py + /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/outputs/optimum_parameters_metrics.csv /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/example_optimum_parameters_metrics.csv - - exit_code=$? - echo "Exit code: $exit_code" + /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/outputs/metric_comparison.txt - if [ $exit_code -ne 0 ]; then - echo "Parameter metrics comparison failed" - exit 1 - fi + cp -rv $OUTPUT_DIR/*.csv $OUTPUT_DIR/*.json $OUTPUT_DIR/*.txt $OUTPUT_DIR/parameter_sweep_heatmaps $CI_PROJECT_DIR/fitting_outputs/ artifacts: when: always