From 60dc9a5fc8744e0a2aac20886a07227005194f3b Mon Sep 17 00:00:00 2001
From: lb584 <lb584@cam.ac.uk>
Date: Wed, 1 Feb 2023 12:20:00 +0000
Subject: [PATCH] experimenting with pipeline vartiables
---
.gitlab-ci.yml | 19 +++++++++----------
1 file changed, 9 insertions(+), 10 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 4edb11a..7abac6f 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -120,21 +120,20 @@ full_fat_tests:
tags: ["ewas-production"]
script:
->
- # - export PYTHONPATH="$CI_PYTHON_PATH"
- echo $FULL_FAT_RUN_DATE
+ echo $FULL_FAT_RUN_DATE
- echo $CUSTOM_RUN_DATE
+ echo $CUSTOM_RUN_DATE
# - echo $PYTHONPATH
- echo "this is a manual job"
+ echo "this is a manual job"
- cd $CI_PROJECT_DIR/tests/integration/full/
+ cd $CI_PROJECT_DIR/tests/integration/full/
- ls
+ ls
# - rm /storage/app/EWS_prod/regions/EastAfrica/workspace/DEPOSITION_20230126/STATUS_*
- python3 full_test_deposition.py
- --config /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json
- --outdir /storage/app/EWS_prod/regions/EastAfrica/workspace/
- --email_cred /storage/app/EWS_prod/envs/credentials/Cred_gmail.json
+ python3 full_test_deposition.py
+ --config /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json
+ --outdir /storage/app/EWS_prod/regions/EastAfrica/workspace/
+ --email_cred /storage/app/EWS_prod/envs/credentials/Cred_gmail.json
--
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