From 4ab5e726182c92cecf8f51085558e7884f3c6fe3 Mon Sep 17 00:00:00 2001
From: Jake Smith <jws52@cam.ac.uk>
Date: Tue, 30 Aug 2022 11:00:11 +0100
Subject: [PATCH] Chore: update crontab

---
 crontab.txt | 68 ++++++++++++++++++++++++++++++++---------------------
 1 file changed, 41 insertions(+), 27 deletions(-)

diff --git a/crontab.txt b/crontab.txt
index 19454f5..4e4af8f 100644
--- a/crontab.txt
+++ b/crontab.txt
@@ -1,4 +1,24 @@
-# m h  dom mon dow   command
+# Edit this file to introduce tasks to be run by cron.
+# 
+# Each task to run has to be defined through a single line
+# indicating with different fields when the task will be run
+# and what command to run for the task
+# 
+# To define the time you can provide concrete values for
+# minute (m), hour (h), day of month (dom), month (mon),
+# and day of week (dow) or use '*' in these fields (for 'any').# 
+# Notice that tasks will be started based on the cron's system
+# daemon's notion of time and timezones.
+# 
+# Output of the crontab jobs (including errors) is sent through
+# email to the user the crontab file belongs to (unless redirected).
+# 
+# For example, you can run a backup of all your user accounts
+# at 5 a.m every week with:
+# 0 5 * * 1 tar -zcf /var/backups/home.tgz /home/
+# 
+# For more information see the manual pages of crontab(5) and cron(8)
+# 
 
 # ##############
 # EWS-Coordinator
@@ -13,44 +33,40 @@
 # ----------
 
 # source calculation from surveys
-00 23 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Survey -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
+00 23 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Survey -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --islive
 
 # ----------
 # NAME Deposition
 # ----------
 
 # forecast
-16,46 09-22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
+16,46 09-22 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --islive
 
 # analysis (Wednesday, dated for previous week)
-26,56 14-22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
+26,56 14-22 * * 3 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
 
 # ----------
 # Environmental suitability
 # ----------
 
-# forecast (fewer scheduled for Wednesday)
-30 9,13,17,21 * * 0-2,4-6 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
-30 9,13 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
+# forecast
+20,50 09-22 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Environment -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --islive
 
-# analysis (Wednesday, dated for previous week) needs 2hrs
-00 17,21 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
+# analysis (Wednesday, dated for previous week)
+07,37 14-22 * * 3 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Environment -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
 
 # ----------
 # Epi model
 # ----------
 
-# old calling method
-#00 17 * * * /storage/app/EWS/General/EWS-EpiModel/run_EpiProcess.sh --islive -c /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Ethiopia_template_stripe_env2p0.json
-# new calling method
-00 17 * * * /storage/app/EWS/General/EWS-Coordinator-Dev/run_Processor.sh -p Epidemiology -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
+02,32 17-23 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Epidemiology -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --islive
 
 # ----------
 # Summary report
 # ----------
 
 # every Tuesday for Ethiopia
-00 17 * * 2 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS/Ethiopia/Resources/EWS-Coordinator/config_EastAfrica_fc_live.json --islive
+03 17 * * 2 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json --islive
 
 # ==========
 # South Asia
@@ -61,43 +77,41 @@
 # ----------
 
 # check for scraped media reports (Friday only)
-00 12 * * 5 /storage/app/EWS/General/EWS-Coordinator/run_GatherScrapedMediaReports.sh
+00 12 * * 5 /storage/app/EWS_prod/code/cooordinator/run_GatherScrapedMediaReports.sh
 
 # source calculation from surveys
-55 22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Survey -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
+55 22 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Survey -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_fc_live.json --islive
 
 # ----------
 # NAME Deposition
 # ----------
 
 # forecast
-01,31 09-22 * * * /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
+01,31 09-22 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_fc_live.json --islive
 
 # analysis (Wednesday, dated for previous week)
-11,41 14-22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
+11,41 14-22 * * 3 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Deposition -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
 
 # ----------
 # Environmental suitability
 # ----------
 
-# forecast (larger region run on Wednesdays)
-00 11,15,19,23 * * 0-2,4-6 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
-00 11,15 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
+# forecast
+05,35 09-22 * * * /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Environment -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_fc_live.json --islive
 
-# analysis (Wednesday, dated for previous week) needs 2hrs
-55 18,22 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Environment -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
+# analysis (Wednesday, dated for previous week)
+12,42 14-22 * * 3 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Environment -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_an_live.json --islive -s `date +\%Y\%m\%d --date '-7 day'`
 
 # ----------
 # Epi model
 # ----------
 
-# forecast (larger region run on Wednesdays)
-#00 16 * * 0-2,4-6 /storage/app/EWS/General/EWS-EpiModel/run_EpiProcess.sh --islive -c /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Bangladesh_template_stripe_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_leaf_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_stem_env2p0.json /storage/app/EWS/General/EWS-EpiModel/configs/config_Nepal_template_stripe_env2p0.json
-#00 16 * * 3 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Epidemiology -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
+# forecast
+#00 16 * * 3 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Epidemiology -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_fc_live.json --islive
 
 # ----------
 # Summary report
 # ----------
 
 # every Monday
-00 17 * * 1 /storage/app/EWS/General/EWS-Coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS/SouthAsia/Resources/EWS-Coordinator/config_SouthAsia_fc_live.json --islive
+00 17 * * 1 /storage/app/EWS_prod/code/coordinator/run_Processor.sh -p Advisory -c /storage/app/EWS_prod/regions/SouthAsia/resources/coordinator/configs/config_SouthAsia_fc_live.json --islive
-- 
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