From 39461c45e73390f00b3bb11abb6af49346c7bb68 Mon Sep 17 00:00:00 2001
From: jws52 <jws52@cam.ac.uk>
Date: Mon, 20 Nov 2023 14:23:31 +0000
Subject: [PATCH] chore: Reflect epi model bug fix
See ews-epidemiology commit 922332e.
---
coordinator/ProcessorEpidemiology.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/coordinator/ProcessorEpidemiology.py b/coordinator/ProcessorEpidemiology.py
index 746bfbc..a462f72 100644
--- a/coordinator/ProcessorEpidemiology.py
+++ b/coordinator/ProcessorEpidemiology.py
@@ -18,7 +18,7 @@ from rasterio import open as rio_open
# TODO: Package these projects so they are robust for importing
from EpiModel import ( # created by rs481
EpiAnalysis,
- EpiModel,
+ model,
plotRaster
)
from EpiModel.EpiPrep import prep
@@ -560,7 +560,7 @@ class ProcessorEpidemiology(Processor):
try:
- EpiModel.run_epi_model(f"{case_specific_path}/{config_filename}.json")
+ model.run_epi_model(f"{case_specific_path}/{config_filename}.json")
except:
self.logger.exception('Unexpected error in EpiModel')
raise
--
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