diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 838f31456783a709ecd1619c523c51caaa656bf7..634c78a8821af35788d4d619369dfc946b49a43b 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -140,15 +140,15 @@ epi_fit: OUTPUT_DIR="/storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/outputs/" - python3 $PACKAGES_DIR/epimodel/ews/epi_model/fit_lb584.py - /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/sys_config_epi_remote.json - /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/run_config_epi_long_remote.json - $OUTPUT_DIR - 2016 - - mkdir $CI_PROJECT_DIR/fitting_outputs - - cp -rv $OUTPUT_DIR/*.csv $OUTPUT_DIR/*.json $OUTPUT_DIR/parameter_sweep_heatmaps $CI_PROJECT_DIR/fitting_outputs/ +# python3 $PACKAGES_DIR/epimodel/ews/epi_model/fit_lb584.py +# /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/sys_config_epi_remote.json +# /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/data_proc/6.0_epi_pipeline/inputs/configs/run_config_epi_long_remote.json +# $OUTPUT_DIR +# 2016 +# +# mkdir $CI_PROJECT_DIR/fitting_outputs +# +# cp -rv $OUTPUT_DIR/*.csv $OUTPUT_DIR/*.json $OUTPUT_DIR/parameter_sweep_heatmaps $CI_PROJECT_DIR/fitting_outputs/ python3 $PACKAGES_DIR/epimodel/ews/epi_model/epi_fit/params_metrics_file_compare.py /storage/app/EWS_prod/regions/EastAfrica/test_workspace/integration/epi_fit/dev/outputs/optimum_parameters_metrics.csv