From 18c724568fd06f445f34ec0e869088d4a469066b Mon Sep 17 00:00:00 2001
From: lb584 <lb584@cam.ac.uk>
Date: Wed, 1 Feb 2023 14:16:47 +0000
Subject: [PATCH] adding artifact for full fat test output
---
.gitlab-ci.yml | 41 ++++++++++++++++++++++++++---------------
1 file changed, 26 insertions(+), 15 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index d516810..e2f5991 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -133,40 +133,51 @@ half_fat_epi_tests:
full_fat_tests:
when: always
stage: full-fat
- extends: .half_fat_before_script
+# extends: .half_fat_before_script
image: lb584/ews_coordinator:latest
tags: ["ewas-production"]
script:
- >
- echo $FULL_FAT_RUN_DATE
+
+ mkdir $PACKAGES_DIR
+
+ mkdir $OUTPUT_DIR
+
+ echo "stuff2" > $OUTPUT_DIR/log.txt
+
+ echo $TEST_WORKSPACE_DIR
+
+ cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/
+
+ #echo $FULL_FAT_RUN_DATE
- echo $CUSTOM_RUN_DATE
+ #echo $CUSTOM_RUN_DATE
- echo $PYTHONPATH
+ #echo $PYTHONPATH
- echo "this is a manual job"
+ #echo "this is a manual job"
- cd $CI_PROJECT_DIR/tests/integration/full/
+ #cd $CI_PROJECT_DIR/tests/integration/full/
- ls
+ #ls
#rm /storage/app/EWS_prod/regions/EastAfrica/workspace/DEPOSITION_20230126/STATUS_*
- mkdir $OUTPUT_DIR/deposition_123445
+ #mkdir $OUTPUT_DIR/deposition_123445
- touch $OUTPUT_DIR/deposition_123445/log.txt
+ #touch $OUTPUT_DIR/deposition_123445/log.txt
- echo "stuff" > $OUTPUT_DIR/deposition_123445/log.txt
+ #echo "stuff" > $OUTPUT_DIR/deposition_123445/log.txt
- mkdir $OUTPUT_DIR/survey_123445
+ #mkdir $OUTPUT_DIR/survey_123445
- touch $OUTPUT_DIR/survey_123445/log.txt
+ #touch $OUTPUT_DIR/survey_123445/log.txt
- echo "stuff2" > $OUTPUT_DIR/survey_123445/log.txt
+ #echo "stuff2" > $OUTPUT_DIR/survey_123445/log.txt
- echo $TEST_WORKSPACE_DIR
+ #echo $TEST_WORKSPACE_DIR
- cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/
+ #cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/
#python3 full_test_deposition.py
#--config /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json
--
GitLab