diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index d516810357af910c5cedcc954946d66508b9de27..e2f59917791d85447d49757c3631870ef89558fa 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -133,40 +133,51 @@ half_fat_epi_tests: full_fat_tests: when: always stage: full-fat - extends: .half_fat_before_script +# extends: .half_fat_before_script image: lb584/ews_coordinator:latest tags: ["ewas-production"] script: - > - echo $FULL_FAT_RUN_DATE + + mkdir $PACKAGES_DIR + + mkdir $OUTPUT_DIR + + echo "stuff2" > $OUTPUT_DIR/log.txt + + echo $TEST_WORKSPACE_DIR + + cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/ + + #echo $FULL_FAT_RUN_DATE - echo $CUSTOM_RUN_DATE + #echo $CUSTOM_RUN_DATE - echo $PYTHONPATH + #echo $PYTHONPATH - echo "this is a manual job" + #echo "this is a manual job" - cd $CI_PROJECT_DIR/tests/integration/full/ + #cd $CI_PROJECT_DIR/tests/integration/full/ - ls + #ls #rm /storage/app/EWS_prod/regions/EastAfrica/workspace/DEPOSITION_20230126/STATUS_* - mkdir $OUTPUT_DIR/deposition_123445 + #mkdir $OUTPUT_DIR/deposition_123445 - touch $OUTPUT_DIR/deposition_123445/log.txt + #touch $OUTPUT_DIR/deposition_123445/log.txt - echo "stuff" > $OUTPUT_DIR/deposition_123445/log.txt + #echo "stuff" > $OUTPUT_DIR/deposition_123445/log.txt - mkdir $OUTPUT_DIR/survey_123445 + #mkdir $OUTPUT_DIR/survey_123445 - touch $OUTPUT_DIR/survey_123445/log.txt + #touch $OUTPUT_DIR/survey_123445/log.txt - echo "stuff2" > $OUTPUT_DIR/survey_123445/log.txt + #echo "stuff2" > $OUTPUT_DIR/survey_123445/log.txt - echo $TEST_WORKSPACE_DIR + #echo $TEST_WORKSPACE_DIR - cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/ + #cp -rv $OUTPUT_DIR/* $TEST_WORKSPACE_DIR/ #python3 full_test_deposition.py #--config /storage/app/EWS_prod/regions/EastAfrica/resources/coordinator/configs/config_EastAfrica_fc_live.json