diff --git a/.gitignore b/.gitignore index 7c55899d9e78cee34b520ce0c2287b004092bd69..ead3a8fc4f690ab8a471194cc7624fc6b3cb1154 100644 --- a/.gitignore +++ b/.gitignore @@ -17,5 +17,5 @@ custom_plotting.py /docs/_build/ /docs/_autosummary/ dump.csv -/pipeline_resources/configs/coordinator/Cred-WRT.json -/pipeline_resources/configs/coordinator/sys_config_EastAfrica.json +/pipeline_resources/EastAfrica/configs/coordinator/Cred-WRT.json +/pipeline_resources/EastAfrica/configs/coordinator/sys_config_EastAfrica.json diff --git a/pipeline_resources/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json b/pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json similarity index 100% rename from pipeline_resources/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json rename to pipeline_resources/EastAfrica/configs/advisory_builder/config_EastAfrica_variety_names_tidy.json diff --git a/pipeline_resources/configs/coordinator/README.txt b/pipeline_resources/EastAfrica/configs/coordinator/README.txt similarity index 100% rename from pipeline_resources/configs/coordinator/README.txt rename to pipeline_resources/EastAfrica/configs/coordinator/README.txt diff --git a/pipeline_resources/configs/coordinator/advisory_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/advisory_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/advisory_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/advisory_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/depo_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/depo_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/depo_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/depo_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/env_suit_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/env_suit_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/env_suit_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/env_suit_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/epi_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/epi_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/epi_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/epi_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/log_config.json b/pipeline_resources/EastAfrica/configs/coordinator/log_config.json similarity index 100% rename from pipeline_resources/configs/coordinator/log_config.json rename to pipeline_resources/EastAfrica/configs/coordinator/log_config.json diff --git a/pipeline_resources/configs/coordinator/met_resample_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/met_resample_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/met_resample_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/met_resample_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/survey_config_EastAfrica_fc_live.json b/pipeline_resources/EastAfrica/configs/coordinator/survey_config_EastAfrica_fc_live.json similarity index 100% rename from pipeline_resources/configs/coordinator/survey_config_EastAfrica_fc_live.json rename to pipeline_resources/EastAfrica/configs/coordinator/survey_config_EastAfrica_fc_live.json diff --git a/pipeline_resources/configs/coordinator/template_Cred-WRT.json b/pipeline_resources/EastAfrica/configs/coordinator/template_Cred-WRT.json similarity index 100% rename from pipeline_resources/configs/coordinator/template_Cred-WRT.json rename to pipeline_resources/EastAfrica/configs/coordinator/template_Cred-WRT.json diff --git a/pipeline_resources/configs/coordinator/template_sys_config_EastAfrica.json b/pipeline_resources/EastAfrica/configs/coordinator/template_sys_config_EastAfrica.json similarity index 100% rename from pipeline_resources/configs/coordinator/template_sys_config_EastAfrica.json rename to pipeline_resources/EastAfrica/configs/coordinator/template_sys_config_EastAfrica.json diff --git a/pipeline_resources/configs/met_extractor/FIELD_NAME_CONSTANTS.csv b/pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv similarity index 100% rename from pipeline_resources/configs/met_extractor/FIELD_NAME_CONSTANTS.csv rename to pipeline_resources/EastAfrica/configs/met_extractor/FIELD_NAME_CONSTANTS.csv diff --git a/pipeline_resources/configs/met_extractor/SYS_CONFIG_PINE.json b/pipeline_resources/EastAfrica/configs/met_extractor/SYS_CONFIG_PINE.json similarity index 100% rename from pipeline_resources/configs/met_extractor/SYS_CONFIG_PINE.json rename to pipeline_resources/EastAfrica/configs/met_extractor/SYS_CONFIG_PINE.json diff --git a/pipeline_resources/configs/met_extractor/template_new_extract_config.json b/pipeline_resources/EastAfrica/configs/met_extractor/template_new_extract_config.json similarity index 100% rename from pipeline_resources/configs/met_extractor/template_new_extract_config.json rename to pipeline_resources/EastAfrica/configs/met_extractor/template_new_extract_config.json diff --git a/pipeline_resources/configs/met_extractor/template_operational_config.json b/pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json similarity index 100% rename from pipeline_resources/configs/met_extractor/template_operational_config.json rename to pipeline_resources/EastAfrica/configs/met_extractor/template_operational_config.json diff --git a/pipeline_resources/configs/met_resample/run_config_MetResample.json b/pipeline_resources/EastAfrica/configs/met_resample/run_config_MetResample.json similarity index 100% rename from pipeline_resources/configs/met_resample/run_config_MetResample.json rename to pipeline_resources/EastAfrica/configs/met_resample/run_config_MetResample.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_EAST_AFRICA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_EAST_AFRICA_PINE.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_EAST_AFRICA_PINE.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_EAST_AFRICA_PINE.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_EPI_PINE.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ETHIOPIA_PINE.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_KENYA_PINE.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_TANZANIA_EPI.json diff --git a/pipeline_resources/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json b/pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json similarity index 100% rename from pipeline_resources/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json rename to pipeline_resources/EastAfrica/configs/plotting/chart/CHART_CONFIG_ZAMBIA_PINE.json diff --git a/pipeline_resources/configs/plotting/deposition/RUN_CONFIG_DEPO.json b/pipeline_resources/EastAfrica/configs/plotting/deposition/RUN_CONFIG_DEPO.json similarity index 100% rename from pipeline_resources/configs/plotting/deposition/RUN_CONFIG_DEPO.json rename to pipeline_resources/EastAfrica/configs/plotting/deposition/RUN_CONFIG_DEPO.json diff --git a/pipeline_resources/configs/plotting/deposition/RUN_CONFIG_DEPO_NORMALIZED.json b/pipeline_resources/EastAfrica/configs/plotting/deposition/RUN_CONFIG_DEPO_NORMALIZED.json similarity index 100% rename from pipeline_resources/configs/plotting/deposition/RUN_CONFIG_DEPO_NORMALIZED.json rename to pipeline_resources/EastAfrica/configs/plotting/deposition/RUN_CONFIG_DEPO_NORMALIZED.json diff --git a/pipeline_resources/configs/plotting/env_suit/RUN_CONFIG_ENV.json b/pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json similarity index 100% rename from pipeline_resources/configs/plotting/env_suit/RUN_CONFIG_ENV.json rename to pipeline_resources/EastAfrica/configs/plotting/env_suit/RUN_CONFIG_ENV.json diff --git a/pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI.json b/pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI.json similarity index 100% rename from pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI.json rename to pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI.json diff --git a/pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI_seasonaccum.json b/pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI_seasonaccum.json similarity index 100% rename from pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI_seasonaccum.json rename to pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI_seasonaccum.json diff --git a/pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI_weekahead.json b/pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI_weekahead.json similarity index 100% rename from pipeline_resources/configs/plotting/epi/RUN_CONFIG_EPI_weekahead.json rename to pipeline_resources/EastAfrica/configs/plotting/epi/RUN_CONFIG_EPI_weekahead.json diff --git a/pipeline_resources/configs/plotting/name_extraction/NAME_EXTRACTION_CONFIG.json b/pipeline_resources/EastAfrica/configs/plotting/name_extraction/NAME_EXTRACTION_CONFIG.json similarity index 100% rename from pipeline_resources/configs/plotting/name_extraction/NAME_EXTRACTION_CONFIG.json rename to pipeline_resources/EastAfrica/configs/plotting/name_extraction/NAME_EXTRACTION_CONFIG.json diff --git a/pipeline_resources/configs/source_gen/config_EastAfrica_mapspam2017.json b/pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json similarity index 100% rename from pipeline_resources/configs/source_gen/config_EastAfrica_mapspam2017.json rename to pipeline_resources/EastAfrica/configs/source_gen/config_EastAfrica_mapspam2017.json